Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0224 ATGTCTAACAACGCCCCAAGTTCTCTAAGATTCTCATCTCTAAGCCGCCTCAACAAGAATTGCCTTAGATGGGTCATGGAGAAAAGATCAGTCCAAGGAGCTTCCATTTGCATCGCCACCTCCTCCAACATGGTAGGTCAAGGTGAAGAACAACAAAGGTTTGTTGTTCCTGTTATATACTTCAACCACCCACTCTTCATGCAATTATTGAAGGAAGCTGAAGAAGAGTATGGTTTTGATCAGAAAGGAACCATAACTATACCTTGCCATGTTGAAGAATTCAGGAACGGAACTGTATAA 300 0.42 MSNNAPSSLRFSSLSRLNKNCLRWVMEKRSVQGASICIATSSNMVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNGTV* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0224 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 96 IPR003676 GO:0009733
Amo12g0224 99 Pfam Auxin responsive protein 43 95 IPR003676 GO:0009733
Amo12g0224 99 PANTHER SMALL AUXIN-UP RNA-RELATED 43 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0224 Amo-Chr12 3431858 3432748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0224 48 95 Calmodulin-binding Proteins AT5G20810 56.250 2.15e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0224 K14488 - nnu:104604679 112.079