Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0223 ATGTTAGGAAGTGAAGAAAAAAAATTGGATCATCATTATCAAAGGAAGAAAGTTATGAATAACAAAGATGCAATAATTCCAAAAGGGTATTTGCCAATCAAAGTAGGGCATGGTGAGGAACAAGAGAAGATTGTTATGCCTGTGATGTATCTCAATCATCCATTGTTTTCTCAGCTTCTTAAGGAGGCAGAAGATGAGTATGGTTTTGATCAACAAGGAACCATAATCATCCCTTGTCATTTGAAGGAGTTTAGGTACATTCAAGAACTTATTGATAGGGATAATAATAATAATAATAATAATAATAATAGTAATAATAATAAATCCCTTCAACACCATCACCACAACCATTTTAGTGGTTGTTTCAAAGGATCATCATCTCAACAAGATCAAGTATAG 399 0.3233 MLGSEEKKLDHHYQRKKVMNNKDAIIPKGYLPIKVGHGEEQEKIVMPVMYLNHPLFSQLLKEAEDEYGFDQQGTIIIPCHLKEFRYIQELIDRDNNNNNNNNNSNNNKSLQHHHHNHFSGCFKGSSSQQDQV* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0223 132 MobiDBLite consensus disorder prediction 95 109 - -
Amo12g0223 132 Pfam Auxin responsive protein 17 90 IPR003676 GO:0009733
Amo12g0223 132 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 18 115 - -
Amo12g0223 132 MobiDBLite consensus disorder prediction 95 132 - -
Amo12g0223 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0223 Amo-Chr12 3384912 3385310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0223 16 128 Calmodulin-binding Proteins AT4G31320 35.897 4.28e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0223 K14488 - gmx:100808516 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0223 12 3384912 3385310 Amo12g0223 12 3384912 3385310 ECH