Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0209 ATGACAAGCCACATTGAGAACCTTTGGGTGTTGGCCTTGGCCTCAAAATGCACACAAGAGAACATTGCATGGTCACTTTTGATCATGGCCATACTCATATGGCTAACCATGTCCTTCTATTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGAAAGTACTATTCCTACTTCTACTACTACCACCGTTACTGCTCTAGTTGGACATCAAAAAAGACATCATTACCGACACAACCTCACCAAGAACAACAACGTTGCTTTTCATCAAACGAGGATAAAAATATGATCCCTGGCCCCAAAGGATACCCTATTATTGGGAGTATGGCCCTTCTGTCTTCCCAACTAGCACACCATCGCATCCTCGCCGCTGCAAAGGCATGCAACGCCACGAGGCTGATGGCGTTCAGTTTGGGAGACACAAGGGCTATAGTCACGTGCCATCCTGATGTGGCACGTGAGATTCTTAATGGGACGGTCTTTGCTGATCGTCCCGTTAAGGAATCAGCTTATAGCCTCATGTTCAACAGGGCCATCGGGTTTGCGGCCCACGGCACTTATTGGCGCACCCTCCGCCGCATCGCCGCCACACACCTTTTTTCACCTAAACAAATTAAGGCCTCGGAGATTCAGAGAGCCGAAATCGCCACAAATATGGCCGCCAGACTCGGCGGTGCTTGCGGTGGCGCCGCCGTCACGGTTCGTGAAGTGCTCAAAACGGCGTCGTTGAGCCACATGATGAGGTTGGTTTTTGGGTATAAGAAAAACTTGGGAATGGAAGGTGAGCTCAGAGGATTAGTGGAAGAAGGATATGATCTATTGGGTACCCTTAACTGGGGGGATCACTTGCCCTTCCTAAGGGACTTTGATTTTCAGAGAATCCGGTTCAGGTGTACGGAACTGGTTCCGAAGGTGAACCGGTTCGTTGGTTCGATCATCGATGAACACCGAACCGACAAGAACAGGAACAGCGCCAACAAGGATTTTGTTGATGTCTTGCTCTCTCTCCAAGGACCCGATAAGTTGTCTGAATCCGACATGATTGCTGTTCTTTGGGAAATGATTTTTAGGGGAACCGACACCGTCTCGGTTTTGATAGAGTGGATACTAGCAAGGATGGTCCTTCATCCAGACGTGCAACGCAAGGTTCAGGATGAGCTGGATATGGTGATTGGCTCACGTGGCACTATAACAGAGGATGACATGGCGGCATTGGTGTACCTCCCGGCTGTGGTAAAGGAAGTTCTAAGGCTTCACCCTCCGGGTCCACTTCTTTCCTGGGCCCGGTTGGCCATAACCGATACCATCGTTGATGGATATCATGTCCCCAAGGGGACTACGGCTATGGTCAACATGTGGGCTATAGCTCGTGACCCGTCTGTATGGAAGGACCCGCTTGAATTTAAGCCCGAGAGGTTCGTTGAGAATGAAGGAGGGGTTGAGTTTTCTGTTCTCGGGTCGGATCTTAGACTTGCTCCTTTTGGGTCTGGTCGACGGGTTTGCCCCGGAAAAACCTTAGGTTTGGCTACTGTGATGTTTTGGGTGGCATCGCTCTTACACAAGTTTGAATGGCTACCTTTAGATGGAATGGACGGTGTTGATCTCTCCGAGGTATTAAGGCTCTCTTGTGAAATGGCTAAGCCTCTCACGGTTAAGGTTTGCCCTAGGCATGTGTCTAATGATATTATTAAGGCTAATTATGAAAATTAG 1704 0.4941 MTSHIENLWVLALASKCTQENIAWSLLIMAILIWLTMSFYYWSHPGGPAWGKYYSYFYYYHRYCSSWTSKKTSLPTQPHQEQQRCFSSNEDKNMIPGPKGYPIIGSMALLSSQLAHHRILAAAKACNATRLMAFSLGDTRAIVTCHPDVAREILNGTVFADRPVKESAYSLMFNRAIGFAAHGTYWRTLRRIAATHLFSPKQIKASEIQRAEIATNMAARLGGACGGAAVTVREVLKTASLSHMMRLVFGYKKNLGMEGELRGLVEEGYDLLGTLNWGDHLPFLRDFDFQRIRFRCTELVPKVNRFVGSIIDEHRTDKNRNSANKDFVDVLLSLQGPDKLSESDMIAVLWEMIFRGTDTVSVLIEWILARMVLHPDVQRKVQDELDMVIGSRGTITEDDMAALVYLPAVVKEVLRLHPPGPLLSWARLAITDTIVDGYHVPKGTTAMVNMWAIARDPSVWKDPLEFKPERFVENEGGVEFSVLGSDLRLAPFGSGRRVCPGKTLGLATVMFWVASLLHKFEWLPLDGMDGVDLSEVLRLSCEMAKPLTVKVCPRHVSNDIIKANYEN* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0209 567 PRINTS P450 superfamily signature 355 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS P450 superfamily signature 490 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS P450 superfamily signature 499 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PANTHER CYTOCHROME P450 78A7-RELATED 1 556 - -
Amo12g0209 567 SUPERFAMILY Cytochrome P450 95 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 Pfam Cytochrome P450 96 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 492 501 IPR017972 GO:0005506|GO:0016705
Amo12g0209 567 PRINTS E-class P450 group I signature 344 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS E-class P450 group I signature 364 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS E-class P450 group I signature 407 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS E-class P450 group I signature 449 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS E-class P450 group I signature 489 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PRINTS E-class P450 group I signature 499 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 Gene3D Cytochrome P450 82 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g0209 567 PANTHER CYTOCHROME P450 78A6 1 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0209 Amo-Chr12 3115999 3118886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0209 1 555 Cytochrome P450 AT2G46660 63.506 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0209 K20619 - gmx:100815292 764.992