Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0205 ATGCAAGAGGTGGTTGAAAGAATAGAAGATCTTCAGAAACGCAAAGATACCCTTGGTCTCAAAGAGATTCCAACGCATAGCTCCTCATCATGGAGACCTTCATCCACAAGTGCTCTTGTCCAGGAGAATGTGTTCGGCAGGGATGGTGATCAACAGGCACTAATCAAGATGCTCAATGACAATAATGATCATAACTTGTCCGTCATCTCTATTGTTGGTATGGGCGGTGTTGGTAAAACTACTTTAGCACAATGCCTGTACAACAATGATGATTTGATGAGGGGGTTTGATCTAAAAGCATGGACTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACAAAGAATCTTATAAAGGGGATCGCTTCAGGTATTTGTAGTCTTGACAGCTTCGATTTAATTCAACAAGATTTGAAGGAAAAACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGCTTGGAGTGAAGATGCTGACAAGTGGAATAGTTTTCTTTCCCCTTTTCAACATGCGAGAAAAGGAAGCACTATTCTTCTAACTACCCGCATGGAAAATGTTGGTCCAATAGTCCAAAATTGTAAATGTTACTTTCTCAAGGGACTGTCAAGTGATGACTGTTGGTCTATTTTTGTGTCCAATTCTCAAATAAGTGGGAGTTCAATACTCGAAGGAATAGGTAGAGAGATTGTCGAGAAGTGTGATGGCTTGCCGTTAGCTGTAGAAACACTTGGACGCTTGTTGCGCTCAAATCATGATGTCGCGGAGTGGAATAAAATACTATCAAGTGATATTTGGGAACTTCCTCAGGAAAATGGTAAGATTGTTCCTGCATTGTTATTAAGTTATCATCAACTGCGTGAACAATCAAAAGGCTGTTTCATTTATTGCTCGTTGTTTCCAAAAGATTATTATTTTGATAAAGATGAACTAATCTTGCTGTGGATGGCTGAAAACATTTTACAATCACCAAGAAGAGGAAAGACTTTAGAAGAAGTTGGTTACATGTGTTTTAATGAACTAGTTTCCAGATTATTTTTCAGAAAAGTTGAATTTCATCACAATTATTTTGTGATGCACGATCTGTTCCATGACTTAGCCATACATCTTGCTGGAGAATTCTATTGCAACTTGGAAAAACTTGATGAAGAAGAGGAGATACATTTTCAGACTCGGCATTTGTCATTTGGAAGATTGAATAGTCGTAATTCCATTGCTATGTTGGAAAATCTATCGACATGCTTGTATGTCGACGATTTGTTTAGCATGGAAAGCATAGCATCAAATTTAAAAAACTTGAGAGTTTTATCCTGTTGTAGACTTGATGTATTGCCTGATGTAATAGGCAAATTGATTCATCTACGCTATTTGAATTTCTCTTGGACAAATATTAAGACATTGCCAGAGTCGTTATGCAACTTGTATAATCTACAAACATTAATATTGTATGAATGTACTAAGTTGACCATGTTGCCTAGTGGCACGCACAAGCTTGTGAATTTACGGCATCTTGATGTTAGAAAAACTGCTTTGAAAGAAATGCCCAGAAGAATAAGCCAATTGAAAGTCTTGCAATTTTTAAGTAGCTTTGTTGTGGGCAAGCAGGAAGATAACGGAATCCAAGAAGTAGGAGGGCTTGCAAATCTTCACCGATCATTTGAGATTAAGAAGTTGGAGAATGTTGTTGACGTCGGCCAAGGAAGGAGAGCAAGGATACTAGATAAGACGCACATCAACGAATTATGCTTGGAATGGTCTTCAGCTGATGATGTGGTTCAAAACACAGAAACAGTAAGAGATATACTGGAGAGCTTGCAACCGCACAATGACTTGAAAGTGTTGAAAATCAAGGGATACAAGGGTACAACATTTCCAAATTGGTTGGGGAACTTTGCCTACAACAATATGACAAGTGTATCTCTGGTGTCTTGCAACAATTGCTTCAAGCTGCCTTCACTTGGAGAGATAACATCTCTTAAGTCCCTGCGCATTGAAAGGTTTGATCAACTCAGGAGTATTGGCATGGAGTTTTACAAGAACGAAGGGGATCACCATTCTTCGCATATTCCACCATTTCTCTCACTGGAGACATTGGAATTTCATGATATGCCATCTTGGGAGGAGTGGCACTTACCTGACTTTAAAACTTTTTCTCGACTCCAGAAGCTTCAATTAAGAAACTGTCCAATGTTAAAGGGAGACATGCTTAATGCCGTATTCTCGAGGATGGTTTCTTCTTTGTCGGATGGTTTCAAAGTTCGCGAACTACATATGTTGGAAGTTCCAGAAGGATGGAATCGAGAGATGATACTTATTGGCGATACTTTATCAATTAAGGGATGTGTGTCGGTGGTGGATTCTGCGTTTAAGGCAATGAGCAACAACCATCTAAGTCACCTCCAAGAAATACACATCTCAGGGTGTTGGTCTGCTTTATCCATTCCGGGCAATTCTTTACCCAGATCTTTGCAAAAGTTGAAGATCATGGATTGCAGAAAACTGGAATTCCCCCAGCAACAGCCACAGCAGAAGTATGATTTGGTAGAGCTACAAATTGAAGACAGCTGCCATTCACTCACCTCATTATCATTGGATTCCTTTCCCAATCTCAAGAATCTCGAGATATCTTTGTGTCTGAATCTGGAATCAGTTTCAATGTCAGAGCCACCGCACGCTGCTCTTCAACGTCTCACCATCAATGGATGCCATAAATTAGTGTCATTTGCMGGAGAAGGACTGGCTGCACCCAACTTGACTCATCTCAGCATCACATATTGTGACAAGTTGGAGGCATTTCCGAGTCACATGAATACTCTTCTTCCAAGTTTACACTCTCTCTGCATAGGAGCTTGCCGGAAAATCTGTAAGGTGCCAGAGGGTGGCTTGCCGCCTAACTTGAAAGAGCTTGTTTTGGAAGGTAGYGACGAGCAAATGAAGGAGCTATCATGGATGGCCAACTTAGGCGCCCTCACTAAGCTTACTATGGATTTTTCTTGCGTGAGGTCATKCACACAGGTTGGTTTGCTGCCTCATCTTCCCTCCCTTACCACTTTGCACCTTTGTTACTTTCAAAATCTGGAGACTTTGGAGTGCAACCAGCTTCTCGGCCTCACTTCGCTCCAACAATTACACATTTCATATTGTCCAAAGCTGGAGAAGATGGAAGGAGAAAAGCTGCCTTCCTCTCTCTCACTACTCAAAATTCAAGACTGTGATTTGCTGGGAGAACACTGCAAGAACAAACATGAACCAATTTGGCCTAAAATTTCCCACATCCCCACCATCGAAACTGTCGGTTGCTTGGAGAACACTGCAAGAAGAAGAGTTGCTGCTAAACTCTGTATGAAGATTTTCCAGGGGCATGAAGAGATGGGTAACTACTAG 3384 0.406 MQEVVERIEDLQKRKDTLGLKEIPTHSSSSWRPSSTSALVQENVFGRDGDQQALIKMLNDNNDHNLSVISIVGMGGVGKTTLAQCLYNNDDLMRGFDLKAWTCVSENFDVVETTKNLIKGIASGICSLDSFDLIQQDLKEKLSEKKFFIVLDDAWSEDADKWNSFLSPFQHARKGSTILLTTRMENVGPIVQNCKCYFLKGLSSDDCWSIFVSNSQISGSSILEGIGREIVEKCDGLPLAVETLGRLLRSNHDVAEWNKILSSDIWELPQENGKIVPALLLSYHQLREQSKGCFIYCSLFPKDYYFDKDELILLWMAENILQSPRRGKTLEEVGYMCFNELVSRLFFRKVEFHHNYFVMHDLFHDLAIHLAGEFYCNLEKLDEEEEIHFQTRHLSFGRLNSRNSIAMLENLSTCLYVDDLFSMESIASNLKNLRVLSCCRLDVLPDVIGKLIHLRYLNFSWTNIKTLPESLCNLYNLQTLILYECTKLTMLPSGTHKLVNLRHLDVRKTALKEMPRRISQLKVLQFLSSFVVGKQEDNGIQEVGGLANLHRSFEIKKLENVVDVGQGRRARILDKTHINELCLEWSSADDVVQNTETVRDILESLQPHNDLKVLKIKGYKGTTFPNWLGNFAYNNMTSVSLVSCNNCFKLPSLGEITSLKSLRIERFDQLRSIGMEFYKNEGDHHSSHIPPFLSLETLEFHDMPSWEEWHLPDFKTFSRLQKLQLRNCPMLKGDMLNAVFSRMVSSLSDGFKVRELHMLEVPEGWNREMILIGDTLSIKGCVSVVDSAFKAMSNNHLSHLQEIHISGCWSALSIPGNSLPRSLQKLKIMDCRKLEFPQQQPQQKYDLVELQIEDSCHSLTSLSLDSFPNLKNLEISLCLNLESVSMSEPPHAALQRLTINGCHKLVSFAGEGLAAPNLTHLSITYCDKLEAFPSHMNTLLPSLHSLCIGACRKICKVPEGGLPPNLKELVLEGSDEQMKELSWMANLGALTKLTMDFSCVRSXTQVGLLPHLPSLTTLHLCYFQNLETLECNQLLGLTSLQQLHISYCPKLEKMEGEKLPSSLSLLKIQDCDLLGEHCKNKHEPIWPKISHIPTIETVGCLENTARRRVAAKLCMKIFQGHEEMGNY* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0205 1127 Coils Coil 1 21 - -
Amo12g0205 1127 Gene3D Ribonuclease Inhibitor 400 762 IPR032675 -
Amo12g0205 1127 SUPERFAMILY L domain-like 789 1077 - -
Amo12g0205 1127 Gene3D Ribonuclease Inhibitor 957 1106 IPR032675 -
Amo12g0205 1127 Pfam NB-ARC domain 51 262 IPR002182 GO:0043531
Amo12g0205 1127 PANTHER OS05G0414200 PROTEIN 1 813 - -
Amo12g0205 1127 PANTHER DISEASE RESISTANCE PROTEIN RP 1 813 IPR044974 GO:0006952
Amo12g0205 1127 Gene3D Ribonuclease Inhibitor 774 956 IPR032675 -
Amo12g0205 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 297 IPR027417 -
Amo12g0205 1127 Gene3D - 34 196 IPR027417 -
Amo12g0205 1127 SUPERFAMILY L domain-like 358 743 - -
Amo12g0205 1127 SMART LRR_typ_2 498 521 IPR003591 -
Amo12g0205 1127 SMART LRR_typ_2 451 474 IPR003591 -
Amo12g0205 1127 Gene3D - 277 369 IPR036388 -
Amo12g0205 1127 PRINTS Disease resistance protein signature 715 731 - -
Amo12g0205 1127 PRINTS Disease resistance protein signature 68 83 - -
Amo12g0205 1127 PRINTS Disease resistance protein signature 141 155 - -
Amo12g0205 1127 PRINTS Disease resistance protein signature 234 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0205 Amo-Chr12 3037878 3042974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0205 56 300 WRKY Transcription Factor Family AT5G45050 24.419 6.30e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0205 - - ahf:112726290 1273.46