Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0192 ATGGCTGATGTTGTTTCTGGTGTGGCATCAACACTCTTAGGCAATCTAGCAACAAAATCTTTTCAAGAGATTGCTCTGGCATGTGGTCTTAAAGATGATGTAAAAAASTTTGAAAGTTCTTTGARAAYCATCAAWGCATATCTCATAGATGCTGAGAACAAGCAAGCAAWAAACYRCAGTATAGATGAGTGGTTGAAGCAACTCAGAGAGGCATTTGATGACGCTGGTGACATATTAGATGAAATAGAGTATGAAGCAAAACTTAATGAAGTGATCAAAATGTATGGAAGCATTTGCACGAAGGTCCGCCGGTTCTTCTCATATACAAGTAATCCACTTGCATTTCGCATCAGAATGGCCCACAAAATCAAAGATATGAAACAGAAGATGGATGAAAAAATAAGAGAAGGGAGAGACTTGGGTATAGTTGAACAACATGTCAACACTCCAGCTCTAGAGCACAATTTACCATGGCGAGAGACTGCTTCTTCATTGTCTTTCCGTGTGTCTGGTAGACTTGAAGAGAAAGAGGAGATTATAAATTCATTGATGACACAAAAATCACAAGCTAATGGTATTGATGTGATCTCAGTTGTTGGGATTGGAGGTTTGGGAAAGACTACACTTGCACAAATGGTTTACAATGATACCCGAGTGAATGAGCATTTTGATCCCTTAATATGGGTGTGTGTATCTGATGATTTTGATGTCAAGAAGCTAATACGAAGAATCATTCATGCGGCCTCAAAGAGAGAGAATGTGGTGGATGCAAATTCTAGTTTGGAATATATGATATCTCTTCTCAATGAAATGTTGCATGGTAAAAAATTCTTACTCGTGTTAGACGATGTTTGGAATGAAAACCACAGCAAATGGGATGAATTGAGAAATCACTTGTTAGAAGCAGGTGGTCACAAAGGCAGCAAAATTATAGTGACCACTCGTAGCCAAAAAGTTGCTGACATTGTGGGGGGTATTCTTTCAATGAAGTTAAAAGAACTTCCTGAGAATGAATGTTGGAGGCTGTTTGCAAAATGTGCATTTCAAGAAGAGAAGGAAGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGGGAGCAAATTGTTAAAAGATGCAAAGGAGTACCCTTGGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATCTCATGATGAAAATGAGTGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCAATCAAGAAGAAACTGACATTTTGCCATCACTCAAATTGAGTTACAATCACTTGCCACCACAAGTAAAGCTATGTTTTTCATACTGCTCTTGTTTTCCAAAGGATTATGAGTACTTGCTTATTGAGTTGATTATGTTCTGGATGGCTCATGGACTCCTCCAACCTACACGCGAAGAAGAAGATGCAGAAGATATTGGGGAGTTGTATATTAAGAAGCTTGTTTCAGCATCTTTACTTCAAATTGAAGGAGATTCTGACCCCTTCCTTGATTTCAAAAATTTAATGACATTTAAAAAACTCAAAATGCATGATCTTGTACATGATGTTGCACAATTAACAATGAAAAAGTCGAGCAAGACAAGAACCGTTATACATGAGGGACAACAAGAAGCATCCATAGAATGGACCTCTAACAAGTTCAACTATCTGAGGGTGTTGGAACTAACAGAAGATATGGAGTTGAGCTCGTTGTCTGATGATTGCTTTGTCACAATGAAGAAGCACTTGAGATTTCTCTATCTTGAAAATCGTCCTAGTTTGAAAAAGTTAACTGATTCCATTTGTAAGATGCAAAATTTGCAGATTTTGCGCCTTGATGGGTTTCCCAAAAACATGAAAAATCTCATCTATCTTCAATATTTGTTTATGATGGAGACAAAAATTACAAGTTTGTCCTCAATGAACATAGGGCGCTTCCAACAACTCAAATTCTTGTATCTTCGTTGTCCAAAGCTAGTGTCCGTACCAAGTGCTGTTAGTCGCTTGACTACTTTAAAGAAGCTGTTTTTTCTTTGGTGTGAAGATCTGGTGAATTTTGAGGATGAAGAGGAAGAAGGAAAGCAACATGTGAATTTAAACCTTCAAGTATTCTTTATCTATGGATCAGAAAAGTTAGATGCTTTACCAAAATGGCTTGAAAGAGCTACTAAATTGCGATATTTGAGAATAAGGACAACAGGGATAAAATCATTGCCCACAAGGCCGATGACCTCTCTTGAAGAACTTTACATCTATGATTGTAAGGAATTGTCATCTCTTCCCAACATGGATCAAACTCATAATCTTCAGTATTTATCGATATATGATTGTCCTACATTATATGAAAGGTACAATAAGCAGACAGATTTATTAATGGTGAAGTTGATGTTAACGCACGTTGATGATATGATGATGATGAAGTTGATGAAGATGAAGATTGAATAA 2421 0.3705 MADVVSGVASTLLGNLATKSFQEIALACGLKDDVKXFESSLXXIXAYLIDAENKQAXNXSIDEWLKQLREAFDDAGDILDEIEYEAKLNEVIKMYGSICTKVRRFFSYTSNPLAFRIRMAHKIKDMKQKMDEKIREGRDLGIVEQHVNTPALEHNLPWRETASSLSFRVSGRLEEKEEIINSLMTQKSQANGIDVISVVGIGGLGKTTLAQMVYNDTRVNEHFDPLIWVCVSDDFDVKKLIRRIIHAASKRENVVDANSSLEYMISLLNEMLHGKKFLLVLDDVWNENHSKWDELRNHLLEAGGHKGSKIIVTTRSQKVADIVGGILSMKLKELPENECWRLFAKCAFQEEKEEEKYPRLKQIGEQIVKRCKGVPLAITTLGCLLRSKSHDENEWRKIRDSEVWNLNQEETDILPSLKLSYNHLPPQVKLCFSYCSCFPKDYEYLLIELIMFWMAHGLLQPTREEEDAEDIGELYIKKLVSASLLQIEGDSDPFLDFKNLMTFKKLKMHDLVHDVAQLTMKKSSKTRTVIHEGQQEASIEWTSNKFNYLRVLELTEDMELSSLSDDCFVTMKKHLRFLYLENRPSLKKLTDSICKMQNLQILRLDGFPKNMKNLIYLQYLFMMETKITSLSSMNIGRFQQLKFLYLRCPKLVSVPSAVSRLTTLKKLFFLWCEDLVNFEDEEEEGKQHVNLNLQVFFIYGSEKLDALPKWLERATKLRYLRIRTTGIKSLPTRPMTSLEELYIYDCKELSSLPNMDQTHNLQYLSIYDCPTLYERYNKQTDLLMVKLMLTHVDDMMMMKLMKMKIE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0192 806 Gene3D - 421 518 IPR036388 -
Amo12g0192 806 CDD RX-CC_like 7 132 IPR038005 -
Amo12g0192 806 PANTHER OS08G0543100 PROTEIN 5 776 - -
Amo12g0192 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 435 IPR027417 -
Amo12g0192 806 SUPERFAMILY L domain-like 501 771 - -
Amo12g0192 806 Pfam NB-ARC domain 175 422 IPR002182 GO:0043531
Amo12g0192 806 Gene3D - 155 325 IPR027417 -
Amo12g0192 806 PRINTS Disease resistance protein signature 271 285 - -
Amo12g0192 806 PRINTS Disease resistance protein signature 733 749 - -
Amo12g0192 806 PRINTS Disease resistance protein signature 371 385 - -
Amo12g0192 806 PRINTS Disease resistance protein signature 195 210 - -
Amo12g0192 806 Gene3D Ribonuclease Inhibitor 522 787 IPR032675 -
Amo12g0192 806 Gene3D - 333 420 IPR042197 -
Amo12g0192 806 PANTHER DISEASE RESISTANCE PROTEIN RP 5 776 IPR044974 GO:0006952
Amo12g0192 806 Pfam Rx N-terminal domain 9 90 IPR041118 -
Amo12g0192 806 Gene3D - 9 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0192 Amo-Chr12 2860658 2864010 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0192 169 525 WRKY Transcription Factor Family AT5G45050 24.064 6.23e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0192 - - aip:107623432 1528.46