Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0188 ATGTTTTGGATGGCGCATGGACTCCTTCAACCTACACGCGAAGACGAAGATGCAGAAGACATTGGAGAGCTGTATATTAATAAGCTAGTTTCAGCTTCTTTGCTTCAAATTGATGCTTCTTCCTACTCCTTTAATTTGAAAAATTCAATGACATTTAAAAGGCTCAAAATGCATGATCTTGTGCATGAACTTGCAAAATTAACAATGAAGGAGTCAAGCAAAGCTAGAAGCATTGTGCAGCTGGGGAAACAAGAAGAAGCATCCATGGAGGAATTGGCCTCTGACAAATTCAACTATCTAAAGGTTTTCAACTTAGAAGAGATGAAATTCACCTCATTGCCTGATAATTGTTTTGCCAAGATGAAGAAACACTTGAGATACCTCAATCTAAAAGGTTGTAGTAGTTTAAAAACACTCCCTAATTCCATTTGTGACTTGCAAAATCTACAATGTTTGAACCTTCCTAAATGTTACAACCTTCAAGAGCTTCCAACAAACATGAAAAATCTCATCAGCCTTCAATATTTTTTTCTAACTGTCAAAGTTACAAGTTTGTCCTCCATGAACATAGGACACTTTCGACAACTCAAATTCTTGTTTCTTTGGTATTGTACAAAGTTAGTGTATGTACCAAGTGCTGTTGGTCGGTTAACTGCTTTAAAGAAGCTAGTGATTCATTGGTGTACTGAACTGGTGAATTTCGAAGGCGAAGAAGAAGAAAAAAAGAAAAATGTGGCAGCCTATAGTTTGAACCTTCAAGTGCTTGTGATTAATGGATCATTCAAGTTGGAAGCTTTATCTGATTGGCTTTACAGAGCTACTAAATTGCGCTATTTGAGAATATGGGGAGGAAGAATGGAATCATTTCCCACATGCTTTCCAAGTAATTCTCTTGAAGAACTTCAATACATTTCTTGTAGACTCTTGTCATTTCTTCCCAACAACTTGGATCAATTTCATAATCTTCAATTCTTAGAGATAGAAGATTGTCCTATACTAAGTGCAAGGTATAACAGGAAGACAGGTCTGAATTTGAAAAAAATTGCTCATATCCCACATTGCGAGATAGATATGCAAGACCAGAATGATGATGATGATGAAGAAGATGGAGGAGATGCAATCAAGATCAAATATGAAGAGAAGAAAGGGAAATAA 1155 0.3628 MFWMAHGLLQPTREDEDAEDIGELYINKLVSASLLQIDASSYSFNLKNSMTFKRLKMHDLVHELAKLTMKESSKARSIVQLGKQEEASMEELASDKFNYLKVFNLEEMKFTSLPDNCFAKMKKHLRYLNLKGCSSLKTLPNSICDLQNLQCLNLPKCYNLQELPTNMKNLISLQYFFLTVKVTSLSSMNIGHFRQLKFLFLWYCTKLVYVPSAVGRLTALKKLVIHWCTELVNFEGEEEEKKKNVAAYSLNLQVLVINGSFKLEALSDWLYRATKLRYLRIWGGRMESFPTCFPSNSLEELQYISCRLLSFLPNNLDQFHNLQFLEIEDCPILSARYNRKTGLNLKKIAHIPHCEIDMQDQNDDDDEEDGGDAIKIKYEEKKGK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0188 384 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 95 251 - -
Amo12g0188 384 Gene3D Ribonuclease Inhibitor 47 244 IPR032675 -
Amo12g0188 384 Gene3D Ribonuclease Inhibitor 245 349 IPR032675 -
Amo12g0188 384 SUPERFAMILY L domain-like 57 336 - -
Amo12g0188 384 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN SOG2 95 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0188 Amo-Chr12 2807493 2809098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0188 123 315 WRKY Transcription Factor Family AT4G12020 26.667 3.56e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0188 - - adu:107473015 389.423