Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0187 ATGGCTGAAGTTGTTTCTGGTGTGGCATCAACACTCTTAGGCAATTTAGCAACAAAATCTTTTCAAGAGATTGCTCTGGCATGYGGTCTTAAAGATGATGTAAAAAAGTTTGAAAGTTCTTTGAGAACCATCAAAGCATATCTCATAGATGCTGAGAACAAGCAAGCAAAAAACCGCAGTATAGATGAGTGGTTGAAGCAACTCAGAGAGGCATTTGATGATGCTGGTGACATATTAGATGAAATAGAGTATGAAGCAAAACTTAATGAAGTGGTCAAAATGTATGGAAGCATTAGCACGAAGGTTCGCCGATTCTTCTCATACACAAGTAATCCACTTGTATTTCGCATCAAAATGGCCCACAAAATCAAAGATATGAAACAGAAGATGGATGAAAAAATAAGAGAAGGGAGAGACTTGGGTATAGTTGAACAACATGTCAACACTCCAGCTCTGGAGCACAATTTACCATGGCGAGAGACTGCTTCTTCATTGCCTTTCCGTGTGTGTGGTAGACTTGAAGAGAAAGAGGAGATTATAAAGTCATTGATGACACAAAAATCAGAAGCTAATAGTATTGATGTGATCTCAATTGTTGGGATTGGTGGTTTGGGAAAGACTACACTTGCACAAATGGCTTACAATGATACCCCAGTGAAGGCGAATTTCGATCCCTTAATGTGGGTGTGTGTATCTGATGATTTTGATGTCAAGAAGCTAATACAAAGAATCATTCATGCAGCCACAAAGAGAGAGAATTTCGTGGATGCAAATTTTAGTTTGGAATATATGATATCTCTTCTCAATCAAACGTTGCATGGTAAAAAATTCTTACTCGTGTTAGACGATGTTTGGAATGAAAACCACAGCAAATGGGATGAATTGAGAAATCACTTGTTAGAAGCAGGTGGTGACAAAGGCAGCAAAATTATAGTGACCACTCGTAGCAGAAAAGTTGCTGACATTATGGGGAGTAATCTTGTAATGAAATTGGAAGGACTTCCTGAGAATGAATGTTGGCGGCTCTTTGCAAAATGTGCATTCCAAGAAGAGAAGGACGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGGGAGCAAATTGTTAAAAAATGCAAAGGAGTACCCTTGGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATCACATGATGAAAATGAGTGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCGATCAAGAAGAAACTGACATTTTGCCATCACTCAAATTGAGTTACAATCACTTGCCATCAGAAGTAAAACAATGTTTTTCATACTGCTCTTGTTTTTCAAAGGATTACGAATATGTTGCTATTGATTTGATTATGTTGTGGATGGCTCATGGACTCCTCCAACCTACACGCGAAGAGGAAGATGCAGAAGATATTGGGGAGTTGTATATTAAGAAGCTTGTTTCAGCATCTTTACTTCAAATTGAAGGAGATTCTAACCCCTACTTTGATTTCAAAAATTTAATGACATTTAAAATACTCAAAATGCATGATCTTGTACATGATCTTGCACAATTAACAATGAAAGAGTCAAGCAGGACAAGAACCGTTATGCAAGAGGGGCAACAAGAAGCATTGATAGAATGGACCTCCGACAAGTTCAACTATCTGAGGGTGTTGCACCTAACAAAATATATGGAATTGAGCTCGTTGCCTGATGATTGCTTTGCCATAATGAAGAAGCACTTGAGATATCTCTTTCTTAGAAATTGTCCTAGTTTGAAAAAGCTTCCTGATTCCATTTGTAAGCTGCAAAGTTTGCAGAGTTTGGGCCTTGGTTGTGACAGCCTTCAAGAACTTCCCAAAAACATGAACAAACTCATCTATCTACAATATTTGTTTTTGATGGGCATCAAAATTACAAGTTTGTCTTCAATGAATATAGGGCGCTTCCAACAACTCAAATGCTTGTATCTTTTGAAATGTTCAAGGTTAGTGTCCGTACCAAGTGCTGTTGGTCGCTTGACTACTTTAAAGAAGTTGGGATTTTATGAGTGTGAAGAGCTGGTGAATTTTGAAGATGAAGAGGAAGAAGGAAAGCAACATGTGGTAATAAATAATTTAAACCTTCAATTATTCTCAATCATTGGGTCTGCGAAGTTGGATGCTTTACCAAAATGGCTTGAAAGAGCTACTAAATTGCGACATTTGAGTATAATGTTAACAGGGATAAAATCATTGCCCACAAGGTTGCCGATGACCTCCCTTGAAGAACTTGATATCTATTGGTGTAAAGAATTGTCATCTCTTCCCAACATGGATCAAACTCATAATCTTCAATATTTACAGATATCTTATTGTCCCAAATTATATGTAAGGTACAATAAGGAGACAGGTTCAGATTGGCCCAAAATTGCTCATATTCCATATTGCAAGTTAATCATTGCTTTTAGTTATTAA 2436 0.3748 MAEVVSGVASTLLGNLATKSFQEIALACGLKDDVKKFESSLRTIKAYLIDAENKQAKNRSIDEWLKQLREAFDDAGDILDEIEYEAKLNEVVKMYGSISTKVRRFFSYTSNPLVFRIKMAHKIKDMKQKMDEKIREGRDLGIVEQHVNTPALEHNLPWRETASSLPFRVCGRLEEKEEIIKSLMTQKSEANSIDVISIVGIGGLGKTTLAQMAYNDTPVKANFDPLMWVCVSDDFDVKKLIQRIIHAATKRENFVDANFSLEYMISLLNQTLHGKKFLLVLDDVWNENHSKWDELRNHLLEAGGDKGSKIIVTTRSRKVADIMGSNLVMKLEGLPENECWRLFAKCAFQEEKDEEKYPRLKQIGEQIVKKCKGVPLAITTLGCLLRSKSHDENEWRKIRDSEVWNLDQEETDILPSLKLSYNHLPSEVKQCFSYCSCFSKDYEYVAIDLIMLWMAHGLLQPTREEEDAEDIGELYIKKLVSASLLQIEGDSNPYFDFKNLMTFKILKMHDLVHDLAQLTMKESSRTRTVMQEGQQEALIEWTSDKFNYLRVLHLTKYMELSSLPDDCFAIMKKHLRYLFLRNCPSLKKLPDSICKLQSLQSLGLGCDSLQELPKNMNKLIYLQYLFLMGIKITSLSSMNIGRFQQLKCLYLLKCSRLVSVPSAVGRLTTLKKLGFYECEELVNFEDEEEEGKQHVVINNLNLQLFSIIGSAKLDALPKWLERATKLRHLSIMLTGIKSLPTRLPMTSLEELDIYWCKELSSLPNMDQTHNLQYLQISYCPKLYVRYNKETGSDWPKIAHIPYCKLIIAFSY* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0187 811 CDD RX-CC_like 7 132 IPR038005 -
Amo12g0187 811 PANTHER DISEASE RESISTANCE PROTEIN RP 5 782 IPR044974 GO:0006952
Amo12g0187 811 PANTHER OS08G0543100 PROTEIN 5 782 - -
Amo12g0187 811 Gene3D - 157 329 IPR027417 -
Amo12g0187 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 435 IPR027417 -
Amo12g0187 811 Gene3D Ribonuclease Inhibitor 521 695 IPR032675 -
Amo12g0187 811 Gene3D Ribonuclease Inhibitor 696 797 IPR032675 -
Amo12g0187 811 Gene3D - 421 519 IPR036388 -
Amo12g0187 811 SUPERFAMILY L domain-like 507 782 - -
Amo12g0187 811 Gene3D - 333 420 IPR042197 -
Amo12g0187 811 Pfam NB-ARC domain 175 421 IPR002182 GO:0043531
Amo12g0187 811 Pfam Rx N-terminal domain 9 90 IPR041118 -
Amo12g0187 811 PRINTS Disease resistance protein signature 195 210 - -
Amo12g0187 811 PRINTS Disease resistance protein signature 743 759 - -
Amo12g0187 811 PRINTS Disease resistance protein signature 271 285 - -
Amo12g0187 811 PRINTS Disease resistance protein signature 371 385 - -
Amo12g0187 811 Coils Coil 173 193 - -
Amo12g0187 811 Gene3D - 9 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0187 Amo-Chr12 2776176 2779092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0187 193 527 WRKY Transcription Factor Family AT5G45050 24.638 6.19e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0187 - - aip:107623432 1328.54