Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo12g0176 | ATGTTGAAAGATGAACGCGGAAATCATATGAAGATGCTTGAGGATTTGAGATCAGATTCATCTGTGAGTATTGAGAAGAATGATTCAGCTAGTCATGAATTCAACAAAAGATTGGTTACTAAGAGAAAAGTTCTTAATCCACATGAGCCACTACTTCAGAAATGGAACAAAATATTTGTGATCACATGTGTCATGGCAATCTTTGTGGACCATCTTTTCTTTTACATCTCAGTTATCAATGACAAGGGAAAATGCCTCAACTTGGATGAAACACTGAAGATCACCGCATGTGTCCTTCGCACATTCTTTGATCTTTTATATGTTCTTCGTATCATCTTTCAGTTTAGAACTGGGTTTATTGCCCCTTCTTCTCGAGTGTTCGGAAGGGGTGAGTTAATTGATGACAGTATTGCTATAATGAAAAGATACTTAACTTCAAATTTCATCATTGACATTCTATCAATTATTCCACTTCCACAGATGATCATCTTACCTATCATACCAGTTCCAAAACGCACTCTTCCATATCTGGCTCAGAATATGCTGAAGTACACAATAATTGTTCAGTATGTGCCAAGGCTTCTGCGGCTTTATCTACTACTCAAAGAAATAACCAACGCTTTTGGCACACTGACTGAGACGGCATGGGTTGGAGCTGCTTATAATCTTCTTCTCTGTATGCTAGCAAGTCATGTAGTTGGAGCTTTTTGGTATCTGTTTTCGGTGGAATCAGAGGTCCGGTGTTGGCACACAAAGTTGAAGCACACTAAATTCTCTGCTGAGTCCTACCTTAGCTGTGGACAACACTACAAACAAGATGTTTTATCACTTTTGAACAGCTCTAACACTTGCCCTTACATTGATATTGATCCTCAAAACAGCAAAGACCCAACAGTTTTCGATTTCGGGATATTTACACCAGCTCTGAAGTCTCATGTGGTAGAATCAACTACAGGTTTTACTCAGAAGTTCTTCTTCTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTCTTGGGCAAAACCTCCTGGGTAGTACTTATATTTGGGAGAATATCTTTGCTATCTTTATTGCGATCTTTGGATTGGTTCTGTTCTCATCACTAATAGGAAACATGCAGAAATATCTACAATCTACAAGCGTAAGTGTTGAAGAGATGAGATTTGAAGAGATGAAAATCAAAAGGAGGGAGGTAGAGCACTGGATGTCCTACAGAATGATACCTAGCTCCTTGAAGGAAAGAATCAGAAGGTATGATAAATACAAATGGCAACAAAATAGGGGTGTTGAGGAGGAAGCATTAACTGGAAGCTTCCCTAAAGATCTCAGAAGGGACATAAAGCGCCATATTTGCTTGCGGTTAATTAGAAGAGTGCCAATGCTTGAGGCCATGAACAACCAGTTATTGGATGCAATGTGTATTAGAATGAAGCCATTCCTTTATACAGAAGACAGCTACATTGTTTGTGAAGGAGATCCAGTCGAAGAAATCCTCTTCATTATGGATGGAAGCCTTGCTTCTGTAACAACAAATGGAGGGAGATCTAGTTTCTTCAACTGTTTTCTCAAGGCTGGTGACTTTTGTGGAGAAGAGCTTTTGGCATGGGCCTTGGATCCTAACTCCTCAAATCTACCCATTTCAACTAGAACAGTACAGACTTTGACAGGAGTTGAAGCCTTTGTTCTCATGGCTGATGACTTGAAGCTTGTTGCTATTCAGTTCTATTCCCATCAATGGAGGACATGGGCTGCATGTTTCATACAAGTAGCTTGGCGTCGGTACCAGAAAAAGAAGATTGAGAAGGCATTACGTGAAGCAGAACGTGGCATACAAGCTTTTACAAGTAAGGATGGGCTTGATGATGAGAGGTCAACATCATCAAATGATTCTACTGATGTTGGATTTCACAATAGAAAACATAAATCAAGAGTAAGTCTATCAAGTGATGGACCAATAAAAAAGGTGGTTACAAGGATCAAAGTTCTTGACCCACAGGGATCACTACTTCAGAAATGGAACAAAATTTTTGTGATCACAAGTGTGATGGCAATATCTGTTGACCCTCTTTTCTTTTACATCCCATTTAGAACTGGGTTTATTGCTCCTTCTTCTCGCGTATTTGTAAGGGGTATGCTGGTTGATGACACTGGTGCTATAATCAAAAGATACTTAAGTTCACATTTTTTCATTGACATTCTATCAATCATTCCACTTCCACAGATGGTCATCTTAGCTATTGTTCCAATCCCAAGATGCTCAGTTCCATACATGGTAAAGAATTTGTTGAAGTACACAGTAATATCTCAGTATGTACCAAGACTTCTGCGACTCTATCAGTTATTCAAAGAAGAAACAAAAACTTGGGGGGCATTAACTGAGACAGCATGGTTCGGAGCTGCTTATAATCTTCTTCTTTATATCGTTGCAAGTCATGTTCGCTGTTGGCAGGGACAGTTGAAACATACTAATTTCTCTACCGAATCCTACCTTAGCTGTGGACAATACTATAAGCAAGATGTTCTATCACTGCTGAATAGTTCTATTTCTTGCCCTTACATTGATACTGAAAACAACATAGATCCAACAGTTTTTGACTTTGGAATATTTACACCAGCTCTACAATCTCGTGTGATAGAATCAACCACAGACTTCACTCAGAAGTTCTTCTTCTGCTTTTGGTGGGGTTTGCGCAATCTAATTGCTCTTGGGCAAACCCTCCTGTGTAGTACTTATATTTGGGAGAATATCTTTGCTATCATCATAGCCATCTTTGGGCTGGTTCTGTTCTGTTCACTTATAGCAAACGTACAGAAATATCTACAATCCGCAACTGTAAAAGTTGAAGACATGAGATTTGAGGAGATTAAATTCAAGAGGAGGGATGTAGAGCGGTGGATATCCCACCGTAAGCTACCAAAAAACTTGAAGGAAAGAATTAAAAGGTATGAACAATACAAATGGCAAGAAAACAAGGGTCTTGAGGAGGAAGACTTAATTGCAAACCTCCCCAAAGATCTCCGAAGGGACATAAAGCGTCATCTTTGCTTGCACTTACTTAAAAAAGTGCCAATGCTTGAGAATGTGGACAAGAGGTTGTTGGATGGCATGTGTGATAGACTGAAGCCAGTCCTTTACACGGAGAAGAGCAACATTGTTTACAAAGGAGATCTGATTGATGAAATGATCTTTATTATGAGTGGAAAACTTGCTAGTACCACAGCAAATGATGGAAGATCTAGTTCTGTCAAATCCTTGCTCTCGGCTGGTGACTTTTGTGGAGAAGAGCTTCTAACATGGGCCTTGAGTCCTAACTCCTTAGATCTACCATTACCAATTTCAAATAGAACAGTAGACACTATATCAGAAGTTGAAGCATTTGCTCTATTGGCTGATGACTTGAAGTTTGTTGTATCTCAATTTCGAAATCTTATAAATAGCAAACAACTCGAGCAAACTTTAAGGCAAGGCTTGACAATACATATAGAATTCAAAACCTTATTCAGCAATGTGTCTCCAGGTTCTTCTCCCAGCAGTGGAGGACGTGGGCTGCATGCTGAGAGGGCCTCTTGTGAAGCAGAAGAACTAGATGCTTTTGCAAATCAGGATGGGCATGCATCTTCACCAAGCTCTGCCACATCTGTATATGTATCAAGGTTTGAGGATCAGAGATTAGAGTCAACTGCAATAACTGAGAAGAGTGGTTGCATTAGTGAGAAATTTCTAAAAACAAAAGTTAAATCATGTTTGAGTCTAGCAAGTGATGGACCAACCATAAAGTTGACTATTTGGAGCCAAGTTCTTGATCCACAGGGGCCACTATTTCAGAAATGGAACAAAATTTTTCTAATCACATGTGTGATGGCAATATATGTGGACCCTCTTTTCTTTTACCTCCCAGTGATCAATGACACAGAGAAATGCCTTAGGTTGGATGAAAAACTAAAGATCACTGCTTGTGTTCTTCGCACACTCTTGGATCTTTTATACATTCTTAGGATCATAATTCAGTTTAGAGCAGGGTTTATTGCACCTTCTTCATGTATGTTGGGAAGGGGTGAGCTGATTGATGAGACTACTACCACTGTGAAGAAATACTTGCGTTCAGATTTCATTATTGATATTCTATCAATTATTCCACTTCCACAGATGGTCACCTTAGCTATCATTCCAATCCCAAATTGCTCAGTTCCATACATGGCAAAGAACTTGCTGAAGTACACAATAATAGTTCAGTATGTGCCAAGAGTTTTGCGACTCTCTCTGTTATTCAAAGAAGTAACCAGAACTTATGGCATACTGACCAAGACAGCATGGTCAGGAGCAGCCTTTAATCTTTTCATTTACATGCTAGCAAGTCATGGAATTGGAGCTTTTTGGTATCTACTTTCAGTAGAATCAGAGGTTCGATGTTGGCAGACACACTTGAAACATAATAAATACTCCACTGCATCCTACCTTAGCTGTGGACAACACTACAAGCAAGATGTTCTATCACTTTTGAACACTTCAACATGCGCTCATGTTGATCCTGATAATAGTACAGATTCAACAGTTTTCAATTTCGGTATTTTTACAACAGCTTTACAATCACGCGTGGTTGAATCGGTTACAGAGTTTCCTCAGAAGTTCTTCTTCTGCTTCTGGTGGGGTTTCTGCAATCTAAGTTCTCTTGGGCAGAACCTTCAATGCAGTACTTACATTTGGGAGAATATCTTTGCTATCTTCATTGCCGTATTGGGATTGATTCTGTTCTCATCACTTATAGGAATCATGCAGAAATATCTACAATCTACATCCCTAAGAGTCGAAGAGATAAGATTTGATGAGATGAAATTCAAAAGAAGAGACATAGAGCGCTGGATGTCCCACCGCATGCTACCAGACACTTTGAAGGAAAGAATTAGGAGGTATGAACAATACAAGTGGCAACAAAATAGGGGTGTTGAGGAGGAAGGAATAATTGGCAGTCTCCCTAAAGATCTCAGAATGGACATAAAGCGTCATCTCTGCTCGGATTTACTTAGAAGAGTACCAATCCTTGAGATCATGGACAGACATCTACTGGATGCCATGTGTGCCAGATTAAAGCCAGTCCTTTATACAGAGAACAGCAGAATTGTTTGCAAAGGAGATCTGATTGATGAAATGCTCTTTATTATACGCGGACAACTTGCTTGTGCCACAACAAATGTTTTCTTCAAGGCTGGTGACTTCTGTGGAGAAGAGCTTATTACGTGGGCCTTTTATCCGAACTCCTCAAATCAATTACCCATTTCAAGAAGATCAATTGAAACAATAACAGAAGTTGAAGCTTCTGTTCTCATGGCTGATGACTTGAAGTTTGTTTTTTCACAATTTCAAGACCTTAATAAAAACAACGAAAAGATCCGTTCTTTTCCCCGCAATGGAGGACATGGGCTGCATGTTTCATACAAGCAGCTTGGCGTCAGCATCGAAAAAAAGAAGGCAAAGAGAGCATACATGAAGCACAAGAGCTGCATGCTATTGCAAGCGAGCAATGGTGTAGCTCCTCAGTAA | 5538 | 0.3965 | MLKDERGNHMKMLEDLRSDSSVSIEKNDSASHEFNKRLVTKRKVLNPHEPLLQKWNKIFVITCVMAIFVDHLFFYISVINDKGKCLNLDETLKITACVLRTFFDLLYVLRIIFQFRTGFIAPSSRVFGRGELIDDSIAIMKRYLTSNFIIDILSIIPLPQMIILPIIPVPKRTLPYLAQNMLKYTIIVQYVPRLLRLYLLLKEITNAFGTLTETAWVGAAYNLLLCMLASHVVGAFWYLFSVESEVRCWHTKLKHTKFSAESYLSCGQHYKQDVLSLLNSSNTCPYIDIDPQNSKDPTVFDFGIFTPALKSHVVESTTGFTQKFFFCFWWGLRNLSSLGQNLLGSTYIWENIFAIFIAIFGLVLFSSLIGNMQKYLQSTSVSVEEMRFEEMKIKRREVEHWMSYRMIPSSLKERIRRYDKYKWQQNRGVEEEALTGSFPKDLRRDIKRHICLRLIRRVPMLEAMNNQLLDAMCIRMKPFLYTEDSYIVCEGDPVEEILFIMDGSLASVTTNGGRSSFFNCFLKAGDFCGEELLAWALDPNSSNLPISTRTVQTLTGVEAFVLMADDLKLVAIQFYSHQWRTWAACFIQVAWRRYQKKKIEKALREAERGIQAFTSKDGLDDERSTSSNDSTDVGFHNRKHKSRVSLSSDGPIKKVVTRIKVLDPQGSLLQKWNKIFVITSVMAISVDPLFFYIPFRTGFIAPSSRVFVRGMLVDDTGAIIKRYLSSHFFIDILSIIPLPQMVILAIVPIPRCSVPYMVKNLLKYTVISQYVPRLLRLYQLFKEETKTWGALTETAWFGAAYNLLLYIVASHVRCWQGQLKHTNFSTESYLSCGQYYKQDVLSLLNSSISCPYIDTENNIDPTVFDFGIFTPALQSRVIESTTDFTQKFFFCFWWGLRNLIALGQTLLCSTYIWENIFAIIIAIFGLVLFCSLIANVQKYLQSATVKVEDMRFEEIKFKRRDVERWISHRKLPKNLKERIKRYEQYKWQENKGLEEEDLIANLPKDLRRDIKRHLCLHLLKKVPMLENVDKRLLDGMCDRLKPVLYTEKSNIVYKGDLIDEMIFIMSGKLASTTANDGRSSSVKSLLSAGDFCGEELLTWALSPNSLDLPLPISNRTVDTISEVEAFALLADDLKFVVSQFRNLINSKQLEQTLRQGLTIHIEFKTLFSNVSPGSSPSSGGRGLHAERASCEAEELDAFANQDGHASSPSSATSVYVSRFEDQRLESTAITEKSGCISEKFLKTKVKSCLSLASDGPTIKLTIWSQVLDPQGPLFQKWNKIFLITCVMAIYVDPLFFYLPVINDTEKCLRLDEKLKITACVLRTLLDLLYILRIIIQFRAGFIAPSSCMLGRGELIDETTTTVKKYLRSDFIIDILSIIPLPQMVTLAIIPIPNCSVPYMAKNLLKYTIIVQYVPRVLRLSLLFKEVTRTYGILTKTAWSGAAFNLFIYMLASHGIGAFWYLLSVESEVRCWQTHLKHNKYSTASYLSCGQHYKQDVLSLLNTSTCAHVDPDNSTDSTVFNFGIFTTALQSRVVESVTEFPQKFFFCFWWGFCNLSSLGQNLQCSTYIWENIFAIFIAVLGLILFSSLIGIMQKYLQSTSLRVEEIRFDEMKFKRRDIERWMSHRMLPDTLKERIRRYEQYKWQQNRGVEEEGIIGSLPKDLRMDIKRHLCSDLLRRVPILEIMDRHLLDAMCARLKPVLYTENSRIVCKGDLIDEMLFIIRGQLACATTNVFFKAGDFCGEELITWAFYPNSSNQLPISRRSIETITEVEASVLMADDLKFVFSQFQDLNKNNEKIRSFPRNGGHGLHVSYKQLGVSIEKKKAKRAYMKHKSCMLLQASNGVAPQ* | 1846 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo12g0176 | 1845 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN | 1236 | 1792 | - | - | |
| Amo12g0176 | 1845 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 1236 | 1792 | - | - | |
| Amo12g0176 | 1845 | Coils | Coil | 596 | 616 | - | - | |
| Amo12g0176 | 1845 | CDD | CAP_ED | 1679 | 1789 | IPR000595 | - | |
| Amo12g0176 | 1845 | CDD | CAP_ED | 1024 | 1143 | IPR000595 | - | |
| Amo12g0176 | 1845 | MobiDBLite | consensus disorder prediction | 617 | 636 | - | - | |
| Amo12g0176 | 1845 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 460 | 544 | IPR000595 | - | |
| Amo12g0176 | 1845 | SMART | cnmp_10 | 460 | 589 | IPR000595 | - | |
| Amo12g0176 | 1845 | SMART | cnmp_10 | 1679 | 1801 | IPR000595 | - | |
| Amo12g0176 | 1845 | SMART | cnmp_10 | 1024 | 1155 | IPR000595 | - |
Showing 1 to 10 of 36 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo12g0176 | K05391 | - | ahf:112708046 | 2840.45 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo16g1267 | 16 | 21713022 | 21718265 | Amo12g0176 | 12 | 2606722 | 2624617 | PCT | |
| Amo12g0176 | 12 | 2606722 | 2624617 | Amo16g1267 | 16 | 21713022 | 21718265 | PCT |
Showing 1 to 2 of 2 entries