Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0136 ATGGGTTCTGTTTGGGCCATCCTGGCCCCTGTCACCACACAGTCACCACTTTGCTACAGGTGGCTGCAGCATTTGACTATCCGTTACTGTTGGCGCGCTCGTGGCGAGGGAACAATCCCTGTAACCATCACAACCGTCAATTTGACAAACCTGAATCTCACTGGAACCATCTCATCCTCGTTTGCCAAGTTAAGTGATCTGCGAGACTTGCATCTTGGTGGGAATAATTTAAGTGAATCAATACCTGAAAGTTTGACCACTTTGTCACGACTGAAGATTCTGGATGTCTCCAACAACAACTTATCGGGGATCATTCCCACATTCTCGCCTAACGTTGTGCTCAATACTGCAAATAATGCTTTTCTTGTTGGGCATTCTCCAACTAATCAACCAAGTCCAACTGCATCTCGAACTAAACCTCATTGGATTAAACTAGGTGCTGCTGCCATAGGTAGCGTTGTTGGAGTTGTTGCAATATTTGGGGTGATTGTTTTTAACCGTAAGAGGCGTCTTAGTTTAGTGCAAAAGATAATCTTGAGTAGAAAAAGAAAACATGTTGATCGCTATGTGGAAAGTCTTATTAAAAGAGAAGGTGGATATAGTATTGTGTATAAAGCAAATTTAGCTGATGGTGAAGAAGTAGCTGTGAAAATACTAAAACAGTCAAAGGGAAGTGTAGAAGAATTTATAGACTGGGTTTTTATCATTAGCAGAACATCTCATGTAAATATTGTTTCACTTTTGGAATTTTGTTATGATAAGAATAAAAGAGCATTGGTCTATGAATTCATGCATAATGACTCTTTGAATAAGTTCACTTATAGAAAAGAACCTTCTGATACTAATTGTAATATGGATTGGAATACCTTGTATCAAATCTCAATTGGAATTGTTCGAGGTCTAGAATATCTACACCACGGATGTAATACAAGAATCTTGCATCTTCATATTAAACTTCAAAATATTCTTCTGGATGAATGTTTTCCCCCAAAGATTGCAGATTTTGGATTGGCTAAAATATGTAAGAAGGATCAAAGTATAGTATCTATAATAGGTACCGGAGGAACTCCAGGGTATATTGCACCAAAAGTATTTAGCCGAACATATGGCGGAGTTTCTCACAAGTCTGATGTATATAGTTATGGTATGCTGATCCTTGAAATTATTGGAGGGAGACAGAACTACTATGAGAATGTACAATCACATGCCAGTGAAATTTGCTTTCCAGATTGGATTTATAAAGATCTTGAGCAAGGTAACATTCCTGCAAACTGTTTGCTCCACAAAGAAGAAGAAAATGGCATTGCAATGAAAATGACTTTGGTGAGCTTATGGTGTATTCAACCAAATCCATTAAATAGGCCATCTATCAGTAAAGTAATAGAGATGCTAGAAGGACTGCTGGAATCAATACCATATCCGCCAAAACCAGCCTTATTTTCTCCTGAAAGATTTATTCCACAATATTCAGATACATCATATAGTAATAGATATGAGACATGTTCAATAACAACTGAGGAAATTGTATCTGATAAAAGCACAGTTGTTGTGCTCATGTTCATCCTAAATAACCATCACCAGAGCCGAAAACTTTTCACCCCAGAGAACAATGCTTATGCCAATTCTACAAAACATACACAAAGAACAGCACCATCTATTCAGTTCTATTTGAAAGTTAAAAATGAGATTGAGCCGAAATTGATGCTAGTTCAAAGAGAATCTGGTGAAAATAGAATGAAACTAAAGCCAACGAGAAAGGTATCTTCACAACAAGAAGCTCTTAGATTCTGA 1791 0.3741 MGSVWAILAPVTTQSPLCYRWLQHLTIRYCWRARGEGTIPVTITTVNLTNLNLTGTISSSFAKLSDLRDLHLGGNNLSESIPESLTTLSRLKILDVSNNNLSGIIPTFSPNVVLNTANNAFLVGHSPTNQPSPTASRTKPHWIKLGAAAIGSVVGVVAIFGVIVFNRKRRLSLVQKIILSRKRKHVDRYVESLIKREGGYSIVYKANLADGEEVAVKILKQSKGSVEEFIDWVFIISRTSHVNIVSLLEFCYDKNKRALVYEFMHNDSLNKFTYRKEPSDTNCNMDWNTLYQISIGIVRGLEYLHHGCNTRILHLHIKLQNILLDECFPPKIADFGLAKICKKDQSIVSIIGTGGTPGYIAPKVFSRTYGGVSHKSDVYSYGMLILEIIGGRQNYYENVQSHASEICFPDWIYKDLEQGNIPANCLLHKEEENGIAMKMTLVSLWCIQPNPLNRPSISKVIEMLEGLLESIPYPPKPALFSPERFIPQYSDTSYSNRYETCSITTEEIVSDKSTVVVLMFILNNHHQSRKLFTPENNAYANSTKHTQRTAPSIQFYLKVKNEIEPKLMLVQRESGENRMKLKPTRKVSSQQEALRF* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0136 596 Pfam Protein kinase domain 197 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0136 596 Gene3D Transferase(Phosphotransferase) domain 1 265 472 - -
Amo12g0136 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 197 504 IPR045874 GO:0004672
Amo12g0136 596 Gene3D Ribonuclease Inhibitor 6 125 IPR032675 -
Amo12g0136 596 ProSiteProfiles Protein kinase domain profile. 189 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0136 596 SUPERFAMILY L domain-like 21 108 - -
Amo12g0136 596 SUPERFAMILY Protein kinase-like (PK-like) 178 465 IPR011009 -
Amo12g0136 596 MobiDBLite consensus disorder prediction 574 596 - -
Amo12g0136 596 Pfam Leucine rich repeat 43 101 IPR001611 GO:0005515
Amo12g0136 596 PANTHER TYROSINE KINASE FAMILY PROTEIN 197 504 - -
Amo12g0136 596 Gene3D Phosphorylase Kinase; domain 1 196 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0136 Amo-Chr12 1977368 1980513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0136 92 513 Receptor kinase-like Gene Family AT5G38260 43.596 1.25e-105 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo12g0136 Pkinase 5.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0136 - - ahf:112729553 689.493