Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0126 ATGAATAGTTCTGGGGGTGTATTGGCCTTGTCTCCTGCGAATAATGTTTTCAACACAAGGGTGCCTCATGATTTTGAGGAGGATTTTACAGAGAAAGATCCTACCGGACGGTACCTTAGGTACAATGAAATCTTGGGGAAGGGTGCCTTCAAGACTGTTTATAGGGCCTTCGATGAAGTCGAAGGAATAGAAGTCGCTTGGAACCAAGTTAGGATTGATGGCCTCTTGCACACAGTAGATGATCTTGCAAAATTGTATTCTGAAGTCAATATACTGAAGTCTTTGAACCATGAGAATATCATTACGTTCTATGATTCTTGGGTTGATGATAAGCAGCATACCGTTAACATGATCACCGAACTTTTTTCATCTGGAAATTTAAGGCAGTACCGTCAAAAGCATAAATATGTTGAAGTGAAAGCCATAAAAGGCTGGGCGAGGCAGATTCTTCAAGGGTTAGCGTATCTTCACAGTCACAAACCACCTATAATTCACAGAGACTTGAAATGTGACAACATCTTTGTTAATGGAAACCATGGAGAAGTCAAGATAGGGGACCTAGGTTTGGCAATTGTCATGCAGCAACCAACTGCTCAAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTTGTTGACATATATTCTTTTGGAATGTGCTTACTAGAGATGGTTACTCTTGAGTATCCATACGTTGAATGTAAAAACCCGGCTCAAATCTTTAAGAAAGTTACCTCGGGCATCAAACCTGCTTCGCTTAATAAGGTGAGCGACCACGAAATTAGGCAATTTATTGAGAAATGTCTTGTTCCGGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTTAAAGATCCGTTCCTGCAAGTTGAGAATGGTCCTAGGCTAGGTCGTAGCAGGTCTCGCCTATCCATGGACATAGATAATGAGGGCAGGCAGAATTATGCAAGCAGTGATGCCGGAAGCAACAAAGGCGGTGTGCATAGTCCTGTTTTCGAAGTTAAGAGGACAAATAAGAACAACGAGTTTAGGTTGACAGGAGCCAAAAATGATGATAACTCGATATCATTGACCTTGCGAATTGCTGATACTAATGGTGGAGTAAGGAATATACATTTTCTCTTCTACCTTGATACAGATACTGCTCTCGCGGTGGCATCAGAGATGGTCGAACATTTGGAGCTTGCAGATCATGATGTAGCCTTCATAGCTGACCTTATCGATTACTTGGTATTTAAGCTTCTACCTTGGTGGAAGCCTTCATCTGCTCGTTGCTCACCTGGCGAATCAATTCAATACAGTGGGTCAACAAATGTAGATGGCCAAACAATGGCAGGTCCATGGAGTTCTGTCCCAAACGATGTTCCCTCCGAGCCGGTTGCTGGTCGAGATAACTTCTCCGAACACAATACATCGAGAGAAGGTTCTGTCTCAAATGAGAAGGACAACTTTTCAGGGGAAGCCGATGATCCTTATTACGAGGACAATCGTAGTTCTTCTGCAAGTCTATGCGACTCAGAATATCAACATTCTCAAGGATCCTTAACTTCATTGTTTGTTGTAGATGATACTCCTATGAAAAGTGACAATGTTCTTTGTTCCAATGCCGAAGAAAACTTTAAATTCCGAAGCACGAGTCCCTCCGTAAGCGAGTTTCATGATACGGATTTCGAGGATTGCAAATTGCACGCGGGGGATTGTGGTTGTGGAGATGGCGAGGTGATAAATGAATTCTCATCAAAGGAGAACTTAGGGCCAATTTTGGAAAGGTCTAATCTTTTGAGTTTGCCATGTAGCTTTTCTTCTGTTTCTTCAACTAATGACATGGATTTTGAACTGAAGTTTGAGCTTCAAGAAATTGAGGCACTGTATCAATCTTGGATTGATGAACTCTGTAGAATGAAGTTAGAGGCATTGGAAGCAGCCAGACAGAGATGGATGGAAAAAAAGAATGTTTCTGCTCATTGA 1992 0.4202 MNSSGGVLALSPANNVFNTRVPHDFEEDFTEKDPTGRYLRYNEILGKGAFKTVYRAFDEVEGIEVAWNQVRIDGLLHTVDDLAKLYSEVNILKSLNHENIITFYDSWVDDKQHTVNMITELFSSGNLRQYRQKHKYVEVKAIKGWARQILQGLAYLHSHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTAQSVIGTPEFMAPELYEEEYNELVDIYSFGMCLLEMVTLEYPYVECKNPAQIFKKVTSGIKPASLNKVSDHEIRQFIEKCLVPASERLSAEELLKDPFLQVENGPRLGRSRSRLSMDIDNEGRQNYASSDAGSNKGGVHSPVFEVKRTNKNNEFRLTGAKNDDNSISLTLRIADTNGGVRNIHFLFYLDTDTALAVASEMVEHLELADHDVAFIADLIDYLVFKLLPWWKPSSARCSPGESIQYSGSTNVDGQTMAGPWSSVPNDVPSEPVAGRDNFSEHNTSREGSVSNEKDNFSGEADDPYYEDNRSSSASLCDSEYQHSQGSLTSLFVVDDTPMKSDNVLCSNAEENFKFRSTSPSVSEFHDTDFEDCKLHAGDCGCGDGEVINEFSSKENLGPILERSNLLSLPCSFSSVSSTNDMDFELKFELQEIEALYQSWIDELCRMKLEALEAARQRWMEKKNVSAH* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0126 663 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 663 - -
Amo12g0126 663 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0126 663 ProSiteProfiles Protein kinase domain profile. 39 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0126 663 Gene3D - 361 432 - -
Amo12g0126 663 PANTHER KINASE DOMAIN PROTEIN 1 663 - -
Amo12g0126 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Amo12g0126 663 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 363 419 IPR024678 GO:0004674|GO:0005524
Amo12g0126 663 Gene3D Phosphorylase Kinase; domain 1 23 120 - -
Amo12g0126 663 SUPERFAMILY Protein kinase-like (PK-like) 31 297 IPR011009 -
Amo12g0126 663 SMART serkin_6 39 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g0126 663 Gene3D Transferase(Phosphotransferase) domain 1 122 301 - -
Amo12g0126 663 MobiDBLite consensus disorder prediction 442 458 - -
Amo12g0126 663 CDD STKc_WNK 37 296 - -
Amo12g0126 663 MobiDBLite consensus disorder prediction 442 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0126 Amo-Chr12 1875076 1879167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0126 26 423 MAP Kinase Kinase Kinase AT5G41990 60.671 1.36e-167 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo12g0126 Pkinase 8.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0126 K08867 - gmx:100272197 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0126 12 1875076 1879167 Amo12g0126 12 1875076 1879167 ECH