Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0112 ATGGCTGAAGCACTTGTTGTTGGAGCTTTAGTTAATGGCTTGGCCAACGTTGTTCTTGACAGGCTCATTTCATCTGAGTTTCTCAACTTGGTGGTGGGCAAGAAGCTGGATCGGAAGTTGGTTGAGAAGCTGAAGACTGCTATCTTGGCTGCCAAAGCTCTGGCAGCTGACGCTGAGCAGAAGCAGTTTGGAAACGAACTCGTGAGGGAGTGGCTTGATAGTCTCAAAGATGCTCTCTACACTGCTGATGACTTGCTGGACCGTCTCTTCATCAAAGCTCAAATTCGCAGTAAGGTACGCACTCGGCTTCCTCACTTCCTTGATCTGTCTGGTAGGAAGATGGTGACTAAGATAGAAGAGGTGGTTGAAAGAATAGAAGATCTTGAGAAACGCAAAGATACCCTTGGTCTGAGAGAGATTCAAACAGGAAGCTCTTCATGGAGACCTCCATCCACTTCTCTTGTGAAGGGGAATGTGTTCGGCAGGGATGGTGACCAACAGGCACTAATCAAGATGCTCAATGACAACAATCATCATAACTTGTCCGTCATCTCTATTGTTGGTATGGGCGGTGTTGGTAAAACAACTTTAGCACAATGGCTCTACAACAATAAGGATTTGATGGACGGGGTTGATCTGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACAAGGAATGTTATAAAGGGGATCTCTTCAGGTGTTTGTAGTCTTGACAGCTTTGATTTACTTCAACAAGATTTGAAGAAAAAACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGATGATGTTTGGAGTGAAGATGCTGACAAGTGGAATAGTTTTATCACCCCTTTTCAAGATGGGAGAAAGGGAAGCACTATTCTTCTAACTACCCGTAAGGTAAATGTTGGTCGAATAGTCCAACACTATAACTCTTACGCTCTCAAGGGACTGTCAGATGATCATTGTTGGTCTATTTTTGCGGACAATGCATCCTTTCCTGAAACAAATGGGAGCTCAGAACTCGAAAGAATAGGTAGAAAGATTGTCAAGAGGTGTGATGGCTTGCCGTTAGCTGCAGAAACACTTGGACGGTTGTTGCGCTCAGAGCGTCATGTTGAAGAATGGAATAAAATACTATCAAGTGACATTTGGGAATTTCGTTTAGCAAATTGTAAGATTGTTCCTGCATTGTTATTAAGTTACCATCATCTGCCTACTCATTTGAAACGATGCTTTGTTTATTGTTCATTGTATCCCAAAGATTATAAACTTGATAAAGATGAATTAATATTGCTGTGGATGGCTGAAAACCTTTTACAACCACCAAGGAGGGGACAAACTTTAGAAGAAGTTGGTTGCGAGTGTTTTAATGACTTGGCTTCAAGACTATTTTTCAAGCAGGTCCATAATGATGATGAGAAGTATTTTCTGATGCATGATCTCATGCATGACTTAGCAACTTTTCTTGCTGGAGATCTTTATTTTAAATTCTCAGAAGAAATTGGTGAAAAGGAAGAGACGAGTATTCTAACTCGTCATTTATCATACGATAGTTCAATCTCCAAGAAAACATTCTCCTCTCACGGAATAGAATCTTTGAGGACATCATTGGATATCAACCACGGATCTTATTTCGCACGCCCAACGTTACCATTTGACATATTGTCAAAGAATAAATACTTGAGAGTTTTGTCCGTTCGTATACTCAATATATCTCCTGATTCAATAGCTAAAAATTTGATCCAATTGCGCTATTTGGATCTCTCTTGGAGTTATATTGTGGTATTGCCGCAGTCGTTATGCAACATGTGCAATCTACAAACTTTAAAGTTACGGGAGTGTTGA 1845 0.4038 MAEALVVGALVNGLANVVLDRLISSEFLNLVVGKKLDRKLVEKLKTAILAAKALAADAEQKQFGNELVREWLDSLKDALYTADDLLDRLFIKAQIRSKVRTRLPHFLDLSGRKMVTKIEEVVERIEDLEKRKDTLGLREIQTGSSSWRPPSTSLVKGNVFGRDGDQQALIKMLNDNNHHNLSVISIVGMGGVGKTTLAQWLYNNKDLMDGVDLKAWICVSENFDVVETTRNVIKGISSGVCSLDSFDLLQQDLKKKLSEKKFFIVLDDVWSEDADKWNSFITPFQDGRKGSTILLTTRKVNVGRIVQHYNSYALKGLSDDHCWSIFADNASFPETNGSSELERIGRKIVKRCDGLPLAAETLGRLLRSERHVEEWNKILSSDIWEFRLANCKIVPALLLSYHHLPTHLKRCFVYCSLYPKDYKLDKDELILLWMAENLLQPPRRGQTLEEVGCECFNDLASRLFFKQVHNDDEKYFLMHDLMHDLATFLAGDLYFKFSEEIGEKEETSILTRHLSYDSSISKKTFSSHGIESLRTSLDINHGSYFARPTLPFDILSKNKYLRVLSVRILNISPDSIAKNLIQLRYLDLSWSYIVVLPQSLCNMCNLQTLKLREC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0112 614 Coils Coil 41 61 - -
Amo12g0112 614 Gene3D - 400 488 IPR036388 -
Amo12g0112 614 Pfam Rx N-terminal domain 7 97 IPR041118 -
Amo12g0112 614 SUPERFAMILY L domain-like 478 614 - -
Amo12g0112 614 PANTHER DISEASE RESISTANCE PROTEIN RP 26 609 IPR044974 GO:0006952
Amo12g0112 614 Gene3D - 316 399 IPR042197 -
Amo12g0112 614 Gene3D - 14 133 - -
Amo12g0112 614 Coils Coil 111 138 - -
Amo12g0112 614 PANTHER OS05G0414200 PROTEIN 26 609 - -
Amo12g0112 614 Pfam NB-ARC domain 166 380 IPR002182 GO:0043531
Amo12g0112 614 Gene3D - 152 311 IPR027417 -
Amo12g0112 614 PRINTS Disease resistance protein signature 183 198 - -
Amo12g0112 614 PRINTS Disease resistance protein signature 256 270 - -
Amo12g0112 614 PRINTS Disease resistance protein signature 352 366 - -
Amo12g0112 614 PRINTS Disease resistance protein signature 601 614 - -
Amo12g0112 614 Gene3D Ribonuclease Inhibitor 509 614 IPR032675 -
Amo12g0112 614 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0112 Amo-Chr12 1596408 1598252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0112 171 413 WRKY Transcription Factor Family AT5G45050 25.681 3.18e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0112 - - aip:107622623 970.304