Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0111 ATGCTGCCTAGTAGCATAGGTGAACTGATCAACCTACGCTATTTGGATCTCTCTTGGAGTGCTGTTAAGACATTGCCTGAGTCATTATGCAACTTGTGCAATCTACAAACTTTGAAGTTAGAAGGCTGTTCAAAGCTGACTATGCTGCCCAATGGCATGTATAATCTTGTGAATTTGCGGCATCTTAATATAAGGGGTACGCCTCTGAAAAAAATGCCAACAGGAATGGGCAAATTACCACGTGACATGAATAGTCTTCTCCCAAATTTAGAGTATCTTGACATACGACGTTGCCCAAACATTTGTAGGTTGCCAGAGGGAGGTTTGCCGCCTAACCTGAAAGAGCTAAGGGTAGGAGAATGCGAGGAACAAGTGAGGGGTGTATCATGGTTGGGCAACTTGGACAACCTCACTCATCTCACCATCTCAGGTGATGGCAGGGAGAGCAGAATAAAGTCATACCCAGAGGTGGGTTTGCTGCCTTGCTTTCCCTCCCTTACCACTTTACATATCCAAAACTTTTATAATCTGGAGATATTGGACTGCAATGAGCTTCTCCACCTCACCTCCCTCCAACAACTACACATTGAGTTCTGTATGAACCTGAACGATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTAATACTGAAAATTGACGACTGTGATTTTCTGGGCGCAGACTGCAAGGACAAGCATCAACAAACTTGGTCCAAAATTTCCCACATCCCCACCATTCAAGCAGCTTGTGCACATATCGAGATGTCCTGTAATAATAACTATTTCTTTCTTTTTGGATTTGGGCACGTTATCAAACAGATTTCCCAAGGTGATGAAGGTATGTAG 846 0.4385 MLPSSIGELINLRYLDLSWSAVKTLPESLCNLCNLQTLKLEGCSKLTMLPNGMYNLVNLRHLNIRGTPLKKMPTGMGKLPRDMNSLLPNLEYLDIRRCPNICRLPEGGLPPNLKELRVGECEEQVRGVSWLGNLDNLTHLTISGDGRESRIKSYPEVGLLPCFPSLTTLHIQNFYNLEILDCNELLHLTSLQQLHIEFCMNLNDMEGEKLPPSLLILKIDDCDFLGADCKDKHQQTWSKISHIPTIQAACAHIEMSCNNNYFFLFGFGHVIKQISQGDEGM* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0111 281 Gene3D Ribonuclease Inhibitor 85 242 IPR032675 -
Amo12g0111 281 SUPERFAMILY L domain-like 2 241 - -
Amo12g0111 281 PANTHER LEUCINE-RICH REPEAT-CONTAINING 132 248 - -
Amo12g0111 281 PANTHER DISEASE RESISTANCE PROTEIN TAO1-LIKE 2 117 - -
Amo12g0111 281 Gene3D Ribonuclease Inhibitor 1 84 IPR032675 -
Amo12g0111 281 PANTHER DISEASE RESISTANCE PROTEIN TAO1-LIKE 132 248 - -
Amo12g0111 281 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 117 - -
Amo12g0111 281 Pfam Leucine Rich Repeat 89 106 IPR001611 GO:0005515
Amo12g0111 281 SMART LRR_typ_2 9 32 IPR003591 -
Amo12g0111 281 SMART LRR_typ_2 56 79 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0111 Amo-Chr12 1594683 1596398 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0111 2 128 WRKY Transcription Factor Family AT4G12020 30.556 6.00e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0111 - - ahf:112733081 382.489