Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0096 ATGTGCCAAATCACTGTTGTTGGGTTTTCTTTTGGTGCTTACCTAATGGGAAACAGTGAGGAAGGAAAATCCACCAAGATTGAAAAGTCATCTTCACCGGTAGCAACGGATCAGACCAATCAGACCAACCAGCAAAATATTCATGTTTATCCTGATTGGAGTGCCATGCAGGCATATTATGGACCAAGAGTCAACATGCCCCCATACTATAACTCGGCTGTGGCTAATGGTCATGCTCCTCATCCATACATGTGGGGACCACCACAGCCTATGATGCCACCTTATGGGCCGCCTTATGCAGCAATCTATTCGCATGGAGGGGTTTATGCTCACCCTGCAGTTGCTATTGGGCCTCATGCACATGGTCAGGGAGTTCCGACTTCGCCTGCTGCTGGGACTCCTTCAAGCGTAGAAACACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAATGAAAAAATTGAAAGGATTTGATGGGCTGGCAATGTCAATAGGCAATGGCAACACTGGAAGTGCAGAGCGTGGAGCGGAAAACAGGCTATCACAGAGTGTGGACACTGAAGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGACTAATCAGACAAGGAAAAGAAGACGTGATGGAACACCAACAACTGACGGGGAAGGGAAAACTGAGATACAAGACAGTCCGGCCCCTAAAGAGAATGCAGCCAATAAGACGATTGCAACTGCCCCAATCAGTATTACAGGAACATTAGCTGCACCTGTTGTTTCTTCAGGTATGACCACAGCACTGGAGTTGATGAACCCTGCATCTCTACATCCTAGGACAAATTCCCCAAATGGGCCACAACCTTGTGCAGTTATGCCTTCAGAAGCTTGGATACAGAACGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAGTCAAACCGTGAATCTGCCAGAAGGTCCAGGCTAAGGAAGCAGGCTGAGGCTGAAGAATTGGCACGAAAAGTCGAAAACTTGACTGCTGAGAATGTGTCGTTGAAATCAGAGATAAATCAATTGAGTGAAAGTTCTGAGAAACTGAGGGTGGAGAATACTACATTAAGGGAAAAACTGAAAAATGCTCAACTGGGACCAGCAGATGAGATAGTTTTGAACAACACTGACAGCAACAGGGCTACCCCTGTGAGTACAGAAAACTTACTATCAAGAGTTAACAATAATTCTAGTTCTGATGATAGAACTGCTGAGGAAACTGATTTTTGTGAGAACAAATCAAACTCTGGGGCAAAGCTGCATCAACTAATGGATACAAATCCTAGAGCTGATGCTGTCGCAGCTGGTTGA 1323 0.458 MCQITVVGFSFGAYLMGNSEEGKSTKIEKSSSPVATDQTNQTNQQNIHVYPDWSAMQAYYGPRVNMPPYYNSAVANGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYAHPAVAIGPHAHGQGVPTSPAAGTPSSVETPTKLSGNTDQGLMKKLKGFDGLAMSIGNGNTGSAERGAENRLSQSVDTEGSSDGSDGNTAGTNQTRKRRRDGTPTTDGEGKTEIQDSPAPKENAANKTIATAPISITGTLAAPVVSSGMTTALELMNPASLHPRTNSPNGPQPCAVMPSEAWIQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVENLTAENVSLKSEINQLSESSEKLRVENTTLREKLKNAQLGPADEIVLNNTDSNRATPVSTENLLSRVNNNSSSDDRTAEETDFCENKSNSGAKLHQLMDTNPRADAVAAG* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0096 440 Gene3D - 298 352 - -
Amo12g0096 440 Pfam G-box binding protein MFMR 16 114 IPR012900 -
Amo12g0096 440 MobiDBLite consensus disorder prediction 120 151 - -
Amo12g0096 440 MobiDBLite consensus disorder prediction 293 319 - -
Amo12g0096 440 MobiDBLite consensus disorder prediction 202 216 - -
Amo12g0096 440 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 297 360 IPR004827 GO:0003700|GO:0006355
Amo12g0096 440 Coils Coil 308 363 - -
Amo12g0096 440 SUPERFAMILY Leucine zipper domain 298 354 IPR046347 GO:0003700|GO:0006355
Amo12g0096 440 MobiDBLite consensus disorder prediction 166 233 - -
Amo12g0096 440 MobiDBLite consensus disorder prediction 166 201 - -
Amo12g0096 440 PANTHER G-BOX-BINDING FACTOR 3 16 440 - -
Amo12g0096 440 CDD bZIP_plant_GBF1 300 348 IPR045314 GO:0003700|GO:0006355
Amo12g0096 440 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 302 317 IPR004827 GO:0003700|GO:0006355
Amo12g0096 440 MobiDBLite consensus disorder prediction 268 282 - -
Amo12g0096 440 MobiDBLite consensus disorder prediction 268 319 - -
Amo12g0096 440 Pfam Disordered region downstream of MFMR 148 274 - -
Amo12g0096 440 MobiDBLite consensus disorder prediction 395 421 - -
Amo12g0096 440 PANTHER G-BOX-BINDING FACTOR 3-RELATED 16 440 IPR044827 GO:0003700|GO:0006355|GO:0043565
Amo12g0096 440 MobiDBLite consensus disorder prediction 128 148 - -
Amo12g0096 440 Pfam bZIP transcription factor 295 357 IPR004827 GO:0003700|GO:0006355
Amo12g0096 440 SMART brlzneu 295 359 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0096 Amo-Chr12 1277204 1280640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0096 16 440 bZIP Transcription Factor Family AT2G46270 50.000 1.54e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo12g0096 MFMR_assoc 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0096 K09060 - gmx:100781875 614.379