Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0074 ATGACACATGGCGTGCATCAGACATGCGAGCTTGAAGGCTTAGTTCAGAAAGAAGCCCTTCATTTATTCTGTCTGAAAGCTTTTAAACAAGATCAACCCAAAAGCAAATATCAGAAATTGTGCAACGAAGTGGTTGAATACACAAGAGGCCTTCCATTGGCACTTGAAGTATTGGGGTCCCATCTTTGTGGAAGAACTCTTGAGGCTTGGCATAATGCTTTAAAACAAATAAGAAGTTCTCCACACCCTGAAATCCAAAATTCATTGAAAATAAGTTTTGAAAGTTTGTCTAGCACAGAGAGAGAAATGTTTTTGGATATTGCTTGTTTCTTCAAAGGCATGAACAAGGATAGAGTAGTAGAAGTGTTAGAAAATTGTGGTCATTTTCCACAAATTGATATTGAAATTTTGATTGACAAATCTTTGGTCACTCTTGGTAGGGATAATATATTGGAAATGCATGATTTACTTGAAGAAATGGGAAAGAATATAGTGTTTCAAGAATCTCCAAATGATCCAGGAAAACGTAGTAGATTGTGGTCTCAAGATGACATCAGCCGTGCGTTGACACAAAATAAGGGAACTGAAGCAATTCAAGCGATAGTAGACTATGCTCGAGCTCAACCATATGAAGCAAGATGGTTCTCCGAACTAATTCAACCAGCAGCACACTATTATCAACTATATGAAGCAAAATGGAGCTCTGAAGAAAGTAAATCATTTGTAGAGTCTGAAGAAATTCAAGCAATAGTAGAATCATATACAGCAAGACGGAAGTCTGAAGAAATTCAAGCAATAGTAGACTATGATCGACCATATAATGCAAGATGGAGCTCTGAAGAAATTCAAGCTATCTTTGAAGATATTCAAGCAATAGTAGCCTATGTTCGACCATATGAAGCAAGATGGAGCTCTGAAGCTTTCTCCAAGACCAGCAACATAAGGTTGCTAAAGATACGTAATGCGTGTTGTCTTTCCCATGGCCTTGATTGCCTTCCTTATGCACTCAGAGTTCTTGACTGGCATGGATGCCCTCTGAAAACTCTGCCACTTACTGATCAACTGGATGTTGTTGACATCAATTTGTCTTGGAGCAAAATTGAACAACTTTGGCATGGAACAAAGATTTTACATAAGTTGAAGTGCATCAACTTGAGTTTTTCCGGTAACCTAAACCAAACCCCTGACTTTGTGGAGGTTCCGAATCTCCAATCGTTAGTTCTTGAAGGTTGTACAAGCCTAACCGAAATCCACTCATCTGTTATGCAGCTCAAGAAACTTGTTCAATTGAACTTAAAAGGCTGCAAAAGGCTCAAAGCTCTTCCAGGTAAAATGGAGATGAGTTCATTAAAGGTTTTAAATCTTTCTGGTTGCTCAAACATGAACACTGTCCCAGACTTTGGGAATTGCATGGGACATCTAGCAGAGCTTCATTTGGATGGAACTGCTGTAACAGAGTTACCTTCATCATTAGCATGTCTGGTTGGACTTGTTCTTTTGCATTTACAGAATTGCATGTATCTTGTTTGCCTTCCAGATACCATTCATAAGTTGAAGTCCCTCAAAGTTCTAATGTTTTCTTATTGCTCGAAACTCAGTAGCTTGCCAGAGTGCCTACAGGAAATGAATAATCTGGAAGAACTTTATGCAAGCAATACTGCCATTGAAGAACTACCTTTATGTTTATGTCATCTAGAAAACATCAAAGTAGTGTCATTTGCTGGTTGCAAAGAGTCAACATCTGAGTTAAATTGCTTTCGAGTTCCATCTGCTGTTTGCCGTCCATCCCTTTTGAGAAGGGGATTTGCTTTCCGAGAACACCATTCGACATGTTATTCACAGGCAATGAAATTCCATCATGGTTTGCACCTCAAAAGTCCTCTTCCTTTGCAGAAATACCATTTCCTCATCCTTCTCCTCCAACTGAATGGCTGGGATTTGCTCTGTGTTTCTTGCTGGTAG 1962 0.3914 MTHGVHQTCELEGLVQKEALHLFCLKAFKQDQPKSKYQKLCNEVVEYTRGLPLALEVLGSHLCGRTLEAWHNALKQIRSSPHPEIQNSLKISFESLSSTEREMFLDIACFFKGMNKDRVVEVLENCGHFPQIDIEILIDKSLVTLGRDNILEMHDLLEEMGKNIVFQESPNDPGKRSRLWSQDDISRALTQNKGTEAIQAIVDYARAQPYEARWFSELIQPAAHYYQLYEAKWSSEESKSFVESEEIQAIVESYTARRKSEEIQAIVDYDRPYNARWSSEEIQAIFEDIQAIVAYVRPYEARWSSEAFSKTSNIRLLKIRNACCLSHGLDCLPYALRVLDWHGCPLKTLPLTDQLDVVDINLSWSKIEQLWHGTKILHKLKCINLSFSGNLNQTPDFVEVPNLQSLVLEGCTSLTEIHSSVMQLKKLVQLNLKGCKRLKALPGKMEMSSLKVLNLSGCSNMNTVPDFGNCMGHLAELHLDGTAVTELPSSLACLVGLVLLHLQNCMYLVCLPDTIHKLKSLKVLMFSYCSKLSSLPECLQEMNNLEELYASNTAIEELPLCLCHLENIKVVSFAGCKESTSELNCFRVPSAVCRPSLLRRGFAFREHHSTCYSQAMKFHHGLHLKSPLPLQKYHFLILLLQLNGWDLLCVSCW* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0074 653 PRINTS Disease resistance protein signature 445 461 - -
Amo12g0074 653 PRINTS Disease resistance protein signature 48 62 - -
Amo12g0074 653 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 296 487 - -
Amo12g0074 653 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 296 487 IPR044974 GO:0006952
Amo12g0074 653 SUPERFAMILY "Winged helix" DNA-binding domain 84 189 IPR036390 -
Amo12g0074 653 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 464 572 - -
Amo12g0074 653 Pfam NB-ARC domain 6 95 IPR002182 GO:0043531
Amo12g0074 653 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 464 572 IPR044974 GO:0006952
Amo12g0074 653 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 203 IPR044974 GO:0006952
Amo12g0074 653 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 203 - -
Amo12g0074 653 SUPERFAMILY L domain-like 300 584 - -
Amo12g0074 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 107 IPR027417 -
Amo12g0074 653 Gene3D Ribonuclease Inhibitor 297 596 IPR032675 -
Amo12g0074 653 Gene3D - 13 101 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0074 Amo-Chr12 1025922 1028507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0074 5 614 WRKY Transcription Factor Family AT5G45050 27.854 3.13e-50 187