Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0059 ATGGCTGAAGCACTTGTGATTGGAGCTTTAGTTAATGGCTTGGCCAACGTTGTTCTTGACAGGCTCATTTCATCTGAGTTTGTCAACTTGGTGGTGGGCAAGAAGCTGGATCGGAAGTTGGTTGACAGGCTGAAGACTGCTATCTTGGCTGCCAAAGCTCTGGCTGCTGATGCTGAGCAGAAGCAGTTTGGAAACGAACTCGTCAGGGAGTGGCTTGATGGTCTCAAAGATGCTCTCTACAATGCTGATGACTTGCTGGACCGTGTCTTCATCAAAGCTCAAATTCACAACAAGGTACGCATTCGTCTTCCTCACTTCCTTGATCTATCTAGTAGGGAGATGGTAACCAAGATAGAAGAGGTGGTTGAAAGAATAGCAGATCTTGAGACTCGCAAAGATACCCTTGGTCTCAAAGAGATTCCAACAGGAAGCTCCTCGTGGAGACCTCCATCCACTTCTCTTGTGAAGGGGAATGTGTTCGGCAGGGATGGTGACCAACAGGCACTAATCAAGATGCTCAATGACAACAATCATCATAACTTGTCCGTCATCTCTATTCTTGGTATGGGCGGTGTTGGTAAAACTACTTTAGCGCAATGGCTCTACAACAATAAGGATTTGATGGACGGGGTTGATCTGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACTAAGAATGTTATAAAGGGGATCTCTTCGGGTGTTTGTAGTCTTGACAGCTTTGATTTACTTCAACAAGATTTGAAGAAAAAACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGCTGATAAGTGGAATAGTTTTATCACCCCTTTTCAACATGGGACAAAGGGAAGCACTATTCTCCTAACTAGCCGCAAGGTAAATGTTGGTCGAATAGTCCAACACTATAACTCTTACACCCTCAATCAACTGTCAGATGATTATTGTTGGTCTATTTTTGCGGAGAATGCATCCTTTCCTGAATCAAATGGGAGCTCAGAACTGGAAGGAATAGGTAGAAAGATTGTCGAAAGGTGTGATGGCTTGCCATTAGCTGCAGAAACACTTGGACGCTTGTTGCGCTCAGAGCATCGTGTTGAAGAATGGAATAAAATACTATCGAGTGACATTTGGGAATTTTCTGTGGCAAATTGCAAGATTGTTCCTGCATTGTTATTGAGTTACCATCATCTGCCTACTCATTTAAAAGGTTGCTTTGTTTATTGTTCATTGTATCCCAAAGATTATCAATTCGATAAGGATGAATTAATCCTGCTATGGATGGCTGAAGATCTTTTGCGGCCTCCAAAGAGGGGAGAGACTTTAGAAGAAGTTGGTTGCGAGTGTTTTGATGAATTGGCTTCAAGACTATTTTTCAAGCAGGTCCAGAACTATATTCAGAAGTATTTTGTGATGCATGATCTCATGCATGACTTGGCAACTTTTCTTGCTGGAGATCTTTGTTGTAGATTTGGTGAAAAAGAAGAGATGAGTATTCTAACTCGGCATTTGTCATACAATCATTCGATTCCTGTGAAAACATGCTCCTCTAGTAAAAACAAATCTTTGAGGACATTATTGTATATCAATAATGGATCTCCTTTCTGGAAACCACGCACAACATTACAATGTGACATATTGTCAAAGAATAAATATTTGAGAGTTTTGTCCTTTGATACACTCGATATATTTCAATATTCAATAGCTAAAAAATTGATCCAATTGCGTTATTTGGATCTATCTTGGAGTGATGTTAAGATATTGCCTGAGTCATTATGCAACTTGTGCAATCTACAAACTTTGAAGTTAGAAGGCTGTTCAAAGCTGACTATGCTGCCCAATGGCATGTATAATCTTGTGAATTTGCGGCATCTTAATATAAGGCGTACGCCTCTGGAAAAAATGCCAAAAGGAATGGGCAAATTAAAACAGTTGCACATTTTAAGCAACTTTGTGGTGGGAAAACAAGAAGACAATGGAATCCAAGAGTTAGGAGGGCTTTTAAATCTTCATGGATCACTTGAGATTCAGAAATTGGAGAAGGTGGTTGATGCAAATGAGGCAAGGAGTGCAAGGATAATAGATAAGAAGCACATTGACGACTTATTGTTGAAATGGTCTCTGTCTTCAGGTGATGATATGGTCTCAAACACACATACTGATGAACAAGATATACTTGGGGGCGCTTGCAACCACACACTGGCTTGA 2226 0.4039 MAEALVIGALVNGLANVVLDRLISSEFVNLVVGKKLDRKLVDRLKTAILAAKALAADAEQKQFGNELVREWLDGLKDALYNADDLLDRVFIKAQIHNKVRIRLPHFLDLSSREMVTKIEEVVERIADLETRKDTLGLKEIPTGSSSWRPPSTSLVKGNVFGRDGDQQALIKMLNDNNHHNLSVISILGMGGVGKTTLAQWLYNNKDLMDGVDLKAWICVSENFDVVETTKNVIKGISSGVCSLDSFDLLQQDLKKKLSEKKFFIVLDDVWSEDADKWNSFITPFQHGTKGSTILLTSRKVNVGRIVQHYNSYTLNQLSDDYCWSIFAENASFPESNGSSELEGIGRKIVERCDGLPLAAETLGRLLRSEHRVEEWNKILSSDIWEFSVANCKIVPALLLSYHHLPTHLKGCFVYCSLYPKDYQFDKDELILLWMAEDLLRPPKRGETLEEVGCECFDELASRLFFKQVQNYIQKYFVMHDLMHDLATFLAGDLCCRFGEKEEMSILTRHLSYNHSIPVKTCSSSKNKSLRTLLYINNGSPFWKPRTTLQCDILSKNKYLRVLSFDTLDIFQYSIAKKLIQLRYLDLSWSDVKILPESLCNLCNLQTLKLEGCSKLTMLPNGMYNLVNLRHLNIRRTPLEKMPKGMGKLKQLHILSNFVVGKQEDNGIQELGGLLNLHGSLEIQKLEKVVDANEARSARIIDKKHIDDLLLKWSLSSGDDMVSNTHTDEQDILGGACNHTLA* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0059 741 Coils Coil 41 61 - -
Amo12g0059 741 Gene3D Ribonuclease Inhibitor 520 696 IPR032675 -
Amo12g0059 741 PANTHER DISEASE RESISTANCE PROTEIN RP 26 726 IPR044974 GO:0006952
Amo12g0059 741 SUPERFAMILY L domain-like 477 677 - -
Amo12g0059 741 PRINTS Disease resistance protein signature 183 198 - -
Amo12g0059 741 PRINTS Disease resistance protein signature 256 270 - -
Amo12g0059 741 PRINTS Disease resistance protein signature 352 366 - -
Amo12g0059 741 PRINTS Disease resistance protein signature 599 615 - -
Amo12g0059 741 Gene3D - 400 488 IPR036388 -
Amo12g0059 741 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 415 IPR027417 -
Amo12g0059 741 Pfam NB-ARC domain 166 380 IPR002182 GO:0043531
Amo12g0059 741 Pfam Rx N-terminal domain 18 96 IPR041118 -
Amo12g0059 741 PANTHER OS05G0414200 PROTEIN 26 726 - -
Amo12g0059 741 Gene3D - 316 399 IPR042197 -
Amo12g0059 741 Coils Coil 111 138 - -
Amo12g0059 741 Gene3D - 152 311 IPR027417 -
Amo12g0059 741 Gene3D - 15 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0059 Amo-Chr12 938230 941391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0059 171 374 WRKY Transcription Factor Family AT5G45050 26.047 3.94e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0059 - - adu:110277895 1178.31