Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0055 ATGGCTGAAGCACTTGTTGTTGGAGCTTTAGTTTCTGGCTCCATCAACCTTGTTCTTAACAGGCTCATTTCACCTGAGTTTGTCAACTTGGTGGTGGGCAAGAAGCTGGACCGGAAGTTGGTTGACAGGCTGAAGACTGCTATTTTGGCTGCCAAAGCTCTGGTTGCTGACGCTGAGCAGAAGCAGTTTGGAAACGAACTCGTCAGGGAGTGGCTTGATAGTCTCAAAGATGCTCTCTACACTGCTGATGACTTGCTGGACCGTGTCTTCATCAAAGCTCAAATTCGCAACAAGGTACGCATTCATCTTCCTCACTTCCTTGATTTGCCTCATAGGAAGTCTAATAGGGAGATGATGACTAAGATAGAAGATGTGGTTGAAAGGATAGTAGATCTTGAGACTCGCAAAGAAACCCTTGGTCTCAAAGAGATTCCAACGGGAAGCTCCTCATGGAGACCTCCATCCACTTCTCTTGTCAAGGGGAATGTGTTTGGCAGGGATGGTGACCAACAGGCACTAATCAAGATGCTCAATGACAACAATCATCATAACTTATCCGTCATCTCTATTGTTGGTATGGGCGGGGTTGGTAAAACTACTTTAGCACAATGGCTCTACAACAATAAGGATTTGATGGACGGGGTTGACCTGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACAAAAAATGTTATAAAGGGGATCTCTTCGGGTGTTTGTAGTCTTGACAGCTTTGATTTACTTCAACAAGATTTGAAGAAAAAACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGCTGATAAGTGGAATAGTTTTATCACCCCTTTTCAACATGGGACAAAGGGAAGCACTATTCTCCTAACTACACGCAAGGTAAATGTTGGTCGAATAGTCCAACACTATAACTCTTACACCCTCAATCAACTGTCAGATGATTATTGTTGGTCTATTTTTGCGGAGAATGCATCCTTTCCTGAATCAAATGGGAGCTCAGAACTGGAAGGAATAGGTAGAAAGATTGTCGAAAGGTGTGATGGCTTGCCGTTAGCTGCAGAAACACTTGGACGCTTGTTGCGCTCAGAGCGTCGTGTTGAAGAATGGAATAAAATACTATCGAGTGACATTTGGGAATTTTCTGTGGCAAATTGCAAGATTGTTCCTGCATTGTTATTGAGTTACCATCATCTGCCTACTCATTTAAAAGGTTGCTTTGTTTATTGTTCATTGTATCCCAAAGATTATCAATTCGATAAGGATGAATTAATCCTGCTATGGATGGCTGAAGATCTTTTGCGGCCTCCAAAGAGGGGAGAGACTTTAGAAGAAGTTGGTTGCGAGTGTTTTGATGAATTGGCTTCAAGACTATTTTTCAAGCAGGTCCATAACTATATTCAGAAGTATTTTGTGATGCATGATCTCATGCATGACTTGGCAACTTTTCTTGCTGGAGATCTTTATTGTAGATTTGGTGAAAAAGAAGAGATGAGTATTCTAACTCGGCATTTGTCATACAATGATTCAATCCCTGAGAAAATATGCTCCTCTAGTAAAAGTGAATCTTTGAGGACATTATTGTATATCAATCATGGAGATCGTTTCTTGAAAGCACGCGCAACATTACCATGTGACATATTGTCAAAGAATAAATACTTGAGAGTTTTGTCCTTTGATACACTCTATATATTTCCTGATTCAATAGCTAAAAAATTGATCCAATTGCGCTATTTGGATCTCTCTTCGAGTGCTGTTATGATATTGCCTGAGTCATTATGCAACTTGTGCAATCTAGAAACTTTAAAGTTAGAAGGATGTTTAGAGCTGACTATGTTGCCTAGTAGCCTGGGTGACTTGATCAACCTACGCTATTTGGATCTCTCTTGGAGTTCTGTTAAGATATTGCCCGAGTCATTATGCAACTTGTGCAATCTACAAACTTTGAAGTTAGAAGGCTGTTCAAAGCTGACTATGCTGCCCAATGGCATGTATAATCTTGTGAATTTGCGGCATCTTAATATAAGGCGTACGCCTTTGGAAAAAATGCCAAAAGGAATGGGCAAATTAAAACAGTTGCACATTTTAAGCAACTTTGTGGTGGGAAAGCAAGACAATGGAATCCAAGAGTTAGGAGGGCTTTTAAATCTTCATGGATCACTTGAGATTGAGAAATTGGAGAATGTGGTTGATGCAAATGAGGCAAGGAGTGCAAGGATAATAGATAAGAAGCACCTTGACGACTTATTGTTGAAATGGTCTCTGTCTTCAGGTGATGATATGGTCTCAAACACACATACTGATGAACAAGATATACTTGGGGGCTTGCAACCACACACTGGCTTGAAAAAGTTGACCGTTGATGGATACAAAGGTAAAATATTTCCAGACTGGATTGGGCATTCCTTGTACCAAAACATGACAAGTGTATCTCTAGAATGTTGCTGGAATTGCTGCGTGGTGCCTTCACTTGGACAGCTGCCATCTCTAAAGTCCCTCCTTATTGAAAGGTTTGATGAGCTGAAGAGCATTGGCAAGGAGTTTTACAAGAATGAAGGCCATCAACATTCTTCGCCTATTGCACCGTTTTTCTCACTGGAGGAATTGATATTTTATATTATGCCAAGTTGGGAGGAATGGCAGTTACCTGGCTCAGAAGCCTTTCCTCAGCTTAAGAGCCTTCAAATAAGAGATTGCCCAATGTTAAAGGGAGATATGCTTAGTCAGGTATTAGTGAGAATCGTTTCTTCCTCATCGGATGTTTCCAAAGTGCGCCTACTTGGAATACGAGAACATTATCAAGTATGGCATAAAGAGATGAGACTTGATGGGGATAGTTTAAGAATTAGTGGATTTGAATCTGTGACAGAGTATGCATTTAAGGCAAGGATCATCCACCATCTAACTTCCCTCCAAGAAATGCTCATCTCATGGTGTTCATCTGTTGTATCCTTGGGGGGCAATTGTTTACCCAAATCTTTGCAAAAGCTCAGAATATATAGGTGCAGCCAAATTGAATTACTCCAGCAACAACAGAAATATGATTTGGTAGATCTACGGATAGAAGAGAGCTGTGATTCACTGACCTCATTGTCGTTGGATACCTTTCCCAATCTCCAGAATCTCCAGATAGAACAGTGTTCAAATCTGGAATCAGTTTCAATGTCAGAGCCACCACACGCTGCTCTTCAACGTGTCACCATCAGTCAATGCTCCAAATTTGTGTCATTGCCATCTGACATGAATAGTCTTCTCCCAAACTTACACTCTCTGGACATACGAGGTTGCCCAAACATTCGTAGGTGGCCAGAGGGTGGTTTGCCGGCTAACCTGAAAGAGCTTAGTGTGGGAGAATGCAAGGAACAAGTGAGGGGTCTATCATGGATGGGCAACTTGGACAACCTCACTCATCTCACCATCTCAGGTCATGGCAGTGAGAGCATAATAGAGTCATACCCAGAGGTGGGATGGCTGCCTCGCCTTCCCTCCCTTACCACTCTACATATCCAAGACTTTCATAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCGCCTCACCTCCCTCCAACAGTTAATAGTTGAAGAGTGTGAGAAGCTGAAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTACTACTCAAAATTTTCGACTGTGGTTTGCTGGGCGAGCACTGCAAGAACAAGCATCAACAAATTTGGTCCAAAATTTCCCACATCCCCACCATTCAAGTTGATAACAGACAAATTCTCTGA 3786 0.4168 MAEALVVGALVSGSINLVLNRLISPEFVNLVVGKKLDRKLVDRLKTAILAAKALVADAEQKQFGNELVREWLDSLKDALYTADDLLDRVFIKAQIRNKVRIHLPHFLDLPHRKSNREMMTKIEDVVERIVDLETRKETLGLKEIPTGSSSWRPPSTSLVKGNVFGRDGDQQALIKMLNDNNHHNLSVISIVGMGGVGKTTLAQWLYNNKDLMDGVDLKAWICVSENFDVVETTKNVIKGISSGVCSLDSFDLLQQDLKKKLSEKKFFIVLDDVWSEDADKWNSFITPFQHGTKGSTILLTTRKVNVGRIVQHYNSYTLNQLSDDYCWSIFAENASFPESNGSSELEGIGRKIVERCDGLPLAAETLGRLLRSERRVEEWNKILSSDIWEFSVANCKIVPALLLSYHHLPTHLKGCFVYCSLYPKDYQFDKDELILLWMAEDLLRPPKRGETLEEVGCECFDELASRLFFKQVHNYIQKYFVMHDLMHDLATFLAGDLYCRFGEKEEMSILTRHLSYNDSIPEKICSSSKSESLRTLLYINHGDRFLKARATLPCDILSKNKYLRVLSFDTLYIFPDSIAKKLIQLRYLDLSSSAVMILPESLCNLCNLETLKLEGCLELTMLPSSLGDLINLRYLDLSWSSVKILPESLCNLCNLQTLKLEGCSKLTMLPNGMYNLVNLRHLNIRRTPLEKMPKGMGKLKQLHILSNFVVGKQDNGIQELGGLLNLHGSLEIEKLENVVDANEARSARIIDKKHLDDLLLKWSLSSGDDMVSNTHTDEQDILGGLQPHTGLKKLTVDGYKGKIFPDWIGHSLYQNMTSVSLECCWNCCVVPSLGQLPSLKSLLIERFDELKSIGKEFYKNEGHQHSSPIAPFFSLEELIFYIMPSWEEWQLPGSEAFPQLKSLQIRDCPMLKGDMLSQVLVRIVSSSSDVSKVRLLGIREHYQVWHKEMRLDGDSLRISGFESVTEYAFKARIIHHLTSLQEMLISWCSSVVSLGGNCLPKSLQKLRIYRCSQIELLQQQQKYDLVDLRIEESCDSLTSLSLDTFPNLQNLQIEQCSNLESVSMSEPPHAALQRVTISQCSKFVSLPSDMNSLLPNLHSLDIRGCPNIRRWPEGGLPANLKELSVGECKEQVRGLSWMGNLDNLTHLTISGHGSESIIESYPEVGWLPRLPSLTTLHIQDFHNLETLECNELLRLTSLQQLIVEECEKLKNMEGEKLPPSLLLLKIFDCGLLGEHCKNKHQQIWSKISHIPTIQVDNRQIL* 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0055 1261 Coils Coil 1195 1215 - -
Amo12g0055 1261 Coils Coil 41 61 - -
Amo12g0055 1261 Gene3D - 156 315 IPR027417 -
Amo12g0055 1261 PANTHER DISEASE RESISTANCE PROTEIN RP 27 637 IPR044974 GO:0006952
Amo12g0055 1261 PANTHER DISEASE RESISTANCE PROTEIN RP 642 996 IPR044974 GO:0006952
Amo12g0055 1261 Gene3D - 320 403 IPR042197 -
Amo12g0055 1261 Gene3D - 18 136 - -
Amo12g0055 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 419 IPR027417 -
Amo12g0055 1261 SMART LRR_typ_2 582 605 IPR003591 -
Amo12g0055 1261 SMART LRR_typ_2 629 652 IPR003591 -
Amo12g0055 1261 SMART LRR_typ_2 676 699 IPR003591 -
Amo12g0055 1261 Gene3D - 404 491 IPR036388 -
Amo12g0055 1261 Coils Coil 115 135 - -
Amo12g0055 1261 Pfam NB-ARC domain 170 384 IPR002182 GO:0043531
Amo12g0055 1261 Gene3D Ribonuclease Inhibitor 507 929 IPR032675 -
Amo12g0055 1261 SUPERFAMILY L domain-like 974 1246 - -
Amo12g0055 1261 PANTHER OS05G0414200 PROTEIN 27 637 - -
Amo12g0055 1261 PANTHER OS05G0414200 PROTEIN 642 996 - -
Amo12g0055 1261 Gene3D Ribonuclease Inhibitor 1094 1248 IPR032675 -
Amo12g0055 1261 SUPERFAMILY L domain-like 481 913 - -
Amo12g0055 1261 Pfam Rx N-terminal domain 38 97 IPR041118 -
Amo12g0055 1261 Gene3D Ribonuclease Inhibitor 949 1087 IPR032675 -
Amo12g0055 1261 PRINTS Disease resistance protein signature 187 202 - -
Amo12g0055 1261 PRINTS Disease resistance protein signature 260 274 - -
Amo12g0055 1261 PRINTS Disease resistance protein signature 356 370 - -
Amo12g0055 1261 PRINTS Disease resistance protein signature 650 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0055 Amo-Chr12 906937 911845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0055 184 662 WRKY Transcription Factor Family AT5G45050 22.752 2.16e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0055 - - aip:107622623 1910.19