Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0029 ATGAAATTTGAAGTAGAAATCATTAGTAGAGAAGACATTAGGCCTTCTTCTCCAACACCCTTTCACTTAAGAACCTTCAAACTCTCCCTGTTGGATCAGCTCATTCCTGCTCCATATGCTCCTATAATCTTGTTCTACACCTCACAAAATGACACAAATACCCTCCTTGAAGTCCCCAAGAAGCTAGAATTGCTGAAACAATCTTTATCTGAGACACTAACACAATTCTACCCTCTAGGTGGCAAGATCAAACATGAACTTTCCATTGATTGCAATGATGAAGGTGCTAATTTTGTAGTATCCAAAGTAAAGTGTCATCTTTCTGTGTTTCTAAGCCACCCCAATTTGACCCTTTTGCACAAGTTCCTTCCTAGTGATGAACTTGTTTCTAAAGAATCAAACTTTGGAACCTATGTCACCAACATCCAAGTGAATATGTTTCAATGTGGTGGAATTGCCATTGGAACATGCATTTCACATAGGATTATAGATGGTGCTGCATTAGCCACATTCCTAAAGTGTTGGAGTGAAAGGGCTAGAGGCTGCAAACACTTGACACAACCAAAGTTCATAGCATCTTCTCTTTTTCCCACAAATAGTTTATGGCTTAGAGACTTATCAATGGGAATGTGGGGTTCCTTGTTCAGGCAAGGAAAGTGTGTAACAAAGAGGTTCTTGTTCACAAACAAAGCTATATCCACCCTCAAGGCTCAAATGTCTGCAAAATATTGCTATGATGCAGCGCAAGATCCACCTACGCGGTTGGAGACTGTTTCTGCAATCTTGTGGAAGTGTCTCGTGGCAGCATCCCAATCGCGGTTTGAAGTGCAAAGGTCTTCTTTTGTGACTCATTTGGTGAACTTGCGGCGGAGAATGGATGAAGCTCTATGTCCTGATCACACCATGGGCAACCTAGTTTGGTTAGTTTCAGCTAAGCATTTCGACGAACACGGGATGAGCATGGATGACTTGGCGTGTAAGCTAAGGAACACAATATCAAGAATCGATAAGGATTTTGTCGACAAATTGCGAAGCGAAAAAGGGATCTCAATCATGAAAGATTCGCTTAGGGAAATATGTGAGTTAAGATCAAGGAATGAAATGGAACATTTTGGGTTTAGTAGTTGGTGCAATCTTGGATTCTATGAAGCTGATTTTGGGTGGGGAAAACCAACATGGGTGAGTAGTGTTGCATCAAATGGTCCTATGTTCATGAATCTCATCATTTTGGTTGATACAAAGTTAAGAGATGGCATTGAAGCTTGGGTTACATTGGATGAAAATGACATGAATCATTTGATTTCAAACACTGAAATCCTCAATTATGCAACTTTGGATCCAAGTCCTTTAGACCAAAGTTATTAA 1365 0.4029 MKFEVEIISREDIRPSSPTPFHLRTFKLSLLDQLIPAPYAPIILFYTSQNDTNTLLEVPKKLELLKQSLSETLTQFYPLGGKIKHELSIDCNDEGANFVVSKVKCHLSVFLSHPNLTLLHKFLPSDELVSKESNFGTYVTNIQVNMFQCGGIAIGTCISHRIIDGAALATFLKCWSERARGCKHLTQPKFIASSLFPTNSLWLRDLSMGMWGSLFRQGKCVTKRFLFTNKAISTLKAQMSAKYCYDAAQDPPTRLETVSAILWKCLVAASQSRFEVQRSSFVTHLVNLRRRMDEALCPDHTMGNLVWLVSAKHFDEHGMSMDDLACKLRNTISRIDKDFVDKLRSEKGISIMKDSLREICELRSRNEMEHFGFSSWCNLGFYEADFGWGKPTWVSSVASNGPMFMNLIILVDTKLRDGIEAWVTLDENDMNHLISNTEILNYATLDPSPLDQSY* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0029 454 Gene3D - 1 202 IPR023213 -
Amo12g0029 454 Gene3D - 218 442 IPR023213 -
Amo12g0029 454 PANTHER VINORINE SYNTHASE-LIKE 5 452 - -
Amo12g0029 454 Pfam Transferase family 4 438 - -
Amo12g0029 454 PANTHER F21J9.9 5 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0029 Amo-Chr12 507694 509058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0029 13 418 Monolignol Biosynthesis Gene Families AT5G48930 24.057 3.01e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0029 - - gmx:100305374 578.556