Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2871 ATGGCTGCAAGAGTAGTAAGACATGGAGTTATTCTTGTACTGCCTCTCTTGCTGGCGAGCTTTGTAACTCAGGCAGGTGGAACAACCCCACAAGACTTCATAAAATCTTCATGCAGAGCAACACGCTACCCTGCTGTCTGCGTGGAATGCCTCATGAGCTACGCAGGCGTGATTGGCCAAAGCAAGAGGCAACTAGCCCTGGCGGCCTTATCAGTGAGCATATCAAGGACACGTTCGTGTTCATCGTTCGTGAAGAAGATGGCGAAGGAGATGAAGATGAAGCCAAGGGAGTTAGGAGCGGTACAGGACTGCATAGAAAACATGGGGGACAGCATAGACAGGCTGAGCCAATCGGTGAGGGAGATGGGGCGCGTGGGTGAAGGAGTGGGAGAGGAATTTGAGTGGCACATGAGCAACGTGCAGACGTGGGTGAGTGCTGCACTCACCGACGACAACACATGTCTTGATGGCTTTGGTGGCCGTGCCATGAATGGGAACGTCAAGGCAGCCATTAGAGGCAGGGTCCTCCATGTTGCTCAGCTCACAAGTAACGCCCTCGCTTTGGTTAATCGCTTTGCTTCCACACACTCTCTTCAAACTTCTCCAATCTTAAACTAA 618 0.5178 MAARVVRHGVILVLPLLLASFVTQAGGTTPQDFIKSSCRATRYPAVCVECLMSYAGVIGQSKRQLALAALSVSISRTRSCSSFVKKMAKEMKMKPRELGAVQDCIENMGDSIDRLSQSVREMGRVGEGVGEEFEWHMSNVQTWVSAALTDDNTCLDGFGGRAMNGNVKAAIRGRVLHVAQLTSNALALVNRFASTHSLQTSPILN* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2871 205 CDD PMEI-like_3 36 194 - -
Amo11g2871 205 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 190 IPR006501 GO:0004857
Amo11g2871 205 Pfam Plant invertase/pectin methylesterase inhibitor 32 188 IPR006501 GO:0004857
Amo11g2871 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 192 IPR035513 -
Amo11g2871 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 192 IPR035513 -
Amo11g2871 205 PANTHER PECTINESTERASE INHIBITOR 9 24 196 - -
Amo11g2871 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 24 196 - -
Amo11g2871 205 SMART PMEI_2 29 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2871 Amo-Chr11 139792015 139793089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2871 34 195 Carbohydrate Esterase AT3G14310 30.061 2.07e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2871 - - mtr:MTR_5g012000 250.366