Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2867 ATGAAGCAAGGGGACAAGCTGAAGGAACATGAATTTGATGTTCCTATACATGAAGAGGCTAGGAAGTTTGCATATCAAACAGGGGTTAAGGTGGTTATTGCTTATGGCGGAGCTCCAATAAACCATCAGCTACGAGATCTTGAGAAGGGGGTGGACATTCTCGTCGCAACTCCTGGAAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATATTGCACTAGATGAGGCAGATAAGATGCTGGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGCCCCCTCCAGATGTAAGACAGACTATGCTATTCAGTGCCACATTTTCTAAAAAGATACAGGTTTAG 378 0.4259 MKQGDKLKEHEFDVPIHEEARKFAYQTGVKVVIAYGGAPINHQLRDLEKGVDILVATPGRLVDLLERARVSLQMIRYIALDEADKMLDMGFEPQIRKIVEQMDMPPPDVRQTMLFSATFSKKIQV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2867 125 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 11 124 - -
Amo11g2867 125 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52C 11 124 - -
Amo11g2867 125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 123 IPR027417 -
Amo11g2867 125 Pfam DEAD/DEAH box helicase 16 123 IPR011545 GO:0003676|GO:0005524
Amo11g2867 125 Gene3D - 11 125 IPR027417 -
Amo11g2867 125 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 16 125 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2867 Amo-Chr11 139718913 139720557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2867 28 118 Eukaryotic Initiation Factors Gene Family AT3G13920 41.758 1.67e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2867 K11594 - ahf:112721994 218.009