Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2836 ATGATGCATGATCATAGAAAAAAGTCCTCTGTAGATGTAGATTTCTTTACAGAGTATGGTGAAGGGAGTAGATACAAAATAGAGGAAGTAATTGGCAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAGATAAATGATATATTTGAACATGTCTCTGATGCTACTCGCATTCTTCGGGAGATCAAGCTTCTTAGACTCTTACGCCATCCTGATATTGTGGAGATTAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAGGATATATATGTTGTTTTTGAACTAATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCGAGAACATTACCAGTTTTTTCTTTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCGAAAAACATTTTAGCAAATGCCGACTGCAAATTGAAGATTTGTGACTTTGGTCTTGCTAGAGTGGCTTTCAACGATACACCAACTGCTATATTCTGGACTGATTATGTTGCTACAAGGTGGTATAGAGCTCCTGAGTTGTGCGGATCCTTTTTCTCCAAGTATACACCAGCAATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTATTAACTGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTCGGAACACCATCTCATGAAGCCATAGCTAGGGTAAGGAACGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAGGAAGAAGCCAGTTCCTTTCTCCCAGAAGTTTCCTAATGCAGACCCCCTTGCCCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAGCCTAAGGATCGACCTACTGCTGATGAGGCTCTAGCTGATCCATATTTCAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACAAAGGAAGATGTACGAGAACTCATATACCGAGAGGCTTTGGAGTACCATCCAAAAATGTTAAAGGAACATCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCGAGTGCTGTTGACCACTTCAAGAAGCAATTTGCATATCTCGAGGAGCATTACGGAAAAGGTGGAACTGTTACTCCACCTGAAAGGCAACATGCATCATTACCCAGGCCATGTGTACTATATTCAGATAAGTCGAAACCGAATGTATGTGAGGTTGCAGAAGATCTCTCCAAGTGTAGCATCAAAGAAAGTGAGAAGCCAGCCATAGATAGGAATGGTGTTATCCCGTTGACCAAACCTCCTTTACATGCTCCTCAAAATATTCAAGGCATAGCTGCCCGGTCTGGGAGAGTTGCTGGTTCGGCGTTGAATTACAACAACTGTGGGGTAGCAGTGACAGCAGAGGCTGCTCAGCGGAGGATGGTTAGAAATCCACCTGTATCGACACAATATGCTGCTTCTAGCTGTTCATATCCTAGAAGAAACCCGAGCTGTAAAACCGAAAGACCAGAAGACAATGGTATTGAAGGTTCTAACGGACTTCAACCGAAGCCTCAATACATGGCACGAAAAGTTGCAGCCGCTCAAGGTGGAGCTGGTGGTCATTGGTAG 1686 0.4276 MMHDHRKKSSVDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSHEAIARVRNEKARRYLSSMRRKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPTADEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREALEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRPCVLYSDKSKPNVCEVAEDLSKCSIKESEKPAIDRNGVIPLTKPPLHAPQNIQGIAARSGRVAGSALNYNNCGVAVTAEAAQRRMVRNPPVSTQYAASSCSYPRRNPSCKTERPEDNGIEGSNGLQPKPQYMARKVAAAQGGAGGHW* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2836 561 MobiDBLite consensus disorder prediction 508 543 - -
Amo11g2836 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Amo11g2836 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Amo11g2836 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2836 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Amo11g2836 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo11g2836 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2836 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2836 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Amo11g2836 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Amo11g2836 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Amo11g2836 561 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2836 Amo-Chr11 139219071 139223590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2836 1 561 MAP Kinase Gene Family AT5G19010 78.883 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo11g2836 Pkinase 9.2e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2836 11 139219071 139223590 Amo11g2836 11 139219071 139223590 ECH
Amo01g3581 01 108587415 108591934 Amo11g2836 11 139219071 139223590 hybridization
Amo11g2836 11 139219071 139223590 Amo14g0506 14 7032247 7037715 PCT
Amo14g0506 14 7032247 7037715 Amo11g2836 11 139219071 139223590 PCT