Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2829 ATGATGTGGTCTGCTCCTCGTTCTGCTTTATCCGCCATGGCCCTTGAGCCACCGCCCTCTCCCCAACCTTCCTCTGCCACCAGCAATGATGGATTGCAAAGCAAACAAAGAGAGCAGAATGAAGCAAAGCAGAGATCAATAATAAGGTCTCTAAGGAGGCTAACTGCGCTATCAACAGGTTCACTTCCAGATGTGGAACCTCCAAGAAGTGAGGATGTCTCTGTATCTAGTATGAAGAGTTGTCCGAGTCCAGGATCCGAAAGCTCCTCTTCCAACACCGGTAGCCCTTCTAATTCCGGGGAGCAGTCGGATTTAAAAGGCAACAATAACAATAAAATGAATGGCATTGTTAGTATTCTGAAGAAAGGATCCCAGATGCCCCTCTATACCTTAACCTCAATCAAGGAGGCTCCGTATTTCAAAAAGAGAACCTCCGCCGAACGAATCCCAGAGGAATTTTCTGCAATTCTTAAACAAGGATCATCTCTTAATCCTGAGGCTTATCGCTTTAAAGCGTCCTGGAAATTATTCACTCTCGCAGATCTCCAGGCCGCGACCAATAATTTCAGCCAGGAGAATTTGATCGGGCAGGGAGGTTATGGTGAGGTTTACAAAGGCCAATTGGCAGATGGAACCTTTGTAGCAATTAAAAGGCTAACAAGAGGGGACCAAGAAGAAATGACTGCAGATTTTTTGTCCGAGCTTGGGATTATAGTGCATGTGGACCACCCCAATATTGCTAAATTGATTGGATATGGAGTTGAAGGTGGAATGCATCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCTTCCATACTATATGGACCTAGAGAGAAACTGAATTGGAACATGAGGTATAAGATTGCATTGGGGACTGCTGAAGGCCTCCACTATCTGCATGCACAATGTCAAAGAAGGATTATTCACAGAGATATCAAGGCTGCTAATATATTGCTTTCAGAGGATTTTGAGCCACAGATAGCTGATTTTGGACTATCTAAATGGTTACCTGACAAATGGACTCACCATACTGTCTCCAAAGTAGAAGGCACATTCGGTTACCTTCCTCCTGAATACTTCATGCATGGTATTGTTGATGAAAAAACTGATGTATTTGCTTATGGAGTGCTATTATTGGAGCTCATTACCGGCCGTCCGGCTTTGGACAAAGCTCAGAAAAGTCTTGTGATGTGGGCAAAACCACTGATATCCAAGAGCAAAATGGACGAGCTTATTGATCCATGTCTTGCTGGTGCCTATGACGAAGAGCAGATGAAATATATAATCTTAACAGCTTCTTTGTGTATAGCGGAGTCGACCGTTCGACCGCGAATGCATCAGGTATTGCAGATAGCAAAAGGTGAAGAAGGCAGCATGGAGTTAGTTAGGGAACTCCTGGAACCTTTATGTGATGATGAGTTCCTTGAAGAAGAGTTTCCTTCACCTGAGAGTTCCAATGACATATCTAAACATTTGCAGACTATTGGACAAGATTAA 1500 0.4387 MMWSAPRSALSAMALEPPPSPQPSSATSNDGLQSKQREQNEAKQRSIIRSLRRLTALSTGSLPDVEPPRSEDVSVSSMKSCPSPGSESSSSNTGSPSNSGEQSDLKGNNNNKMNGIVSILKKGSQMPLYTLTSIKEAPYFKKRTSAERIPEEFSAILKQGSSLNPEAYRFKASWKLFTLADLQAATNNFSQENLIGQGGYGEVYKGQLADGTFVAIKRLTRGDQEEMTADFLSELGIIVHVDHPNIAKLIGYGVEGGMHLVLQLSPHGSLASILYGPREKLNWNMRYKIALGTAEGLHYLHAQCQRRIIHRDIKAANILLSEDFEPQIADFGLSKWLPDKWTHHTVSKVEGTFGYLPPEYFMHGIVDEKTDVFAYGVLLLELITGRPALDKAQKSLVMWAKPLISKSKMDELIDPCLAGAYDEEQMKYIILTASLCIAESTVRPRMHQVLQIAKGEEGSMELVRELLEPLCDDEFLEEEFPSPESSNDISKHLQTIGQD* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2829 499 MobiDBLite consensus disorder prediction 478 499 - -
Amo11g2829 499 MobiDBLite consensus disorder prediction 1 112 - -
Amo11g2829 499 SUPERFAMILY Protein kinase-like (PK-like) 170 452 IPR011009 -
Amo11g2829 499 Pfam Protein kinase domain 190 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2829 499 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 74 463 - -
Amo11g2829 499 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Amo11g2829 499 Gene3D Transferase(Phosphotransferase) domain 1 266 465 - -
Amo11g2829 499 SMART serkin_6 189 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2829 499 MobiDBLite consensus disorder prediction 73 112 - -
Amo11g2829 499 ProSiteProfiles Protein kinase domain profile. 189 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2829 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Amo11g2829 499 PANTHER OS08G0249100 PROTEIN 74 463 - -
Amo11g2829 499 Gene3D Phosphorylase Kinase; domain 1 154 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2829 Amo-Chr11 139010028 139012468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2829 172 468 Receptor kinase-like Gene Family AT4G02010 41.424 5.82e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo11g2829 Pkinase 4.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2829 - - lja:Lj6g3v1915960.1 536.569