Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2808 ATGTCTCCCACAACTCCCTCCCTTCTCGACACCCTCCTCTGCCAAGAAGAACACGACGACACCTTTGACGACACCCRAAACGACGCGTCGTTCCACCTCAACGACAACCACCACGACGAATCACCGTCGTTTTGCCCCGCAAAGCTCCAATCTTTTCCTCATCCCGTTCTGCATGACAACGACCTGTTCTGGGAACACGACGAGCTCGCCTCCTTAATCTCCAAAGAGGRAGAGACCCACGCCGCCGCTGGTAACGACGACGACCACCGTGATGGACTTCTAGATGGGCTTCGAGTTGGGCCCGTTGGCTGGATCACTAACGTGTGTGCGCACTATGGGTTTTCAGCTTTGACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTCGTCACGAGCCTCACGTTTCAAAGGGATAAGCCATGGATGACTCAGTTAACGGCGGTTGCGTGCTTGTCAATYGCTGCAAAGATGGAAGAGACACATGTGCCCCTCCTCTTAGACCTCCAAGTGGAAGAATCGAGGTTTCTGTTTGAAGCAAAGACAATACAAAGAATGGAGCTTCTTGTGTTGTCTACTCTCAAATGGAAGATGCATCCGGTGACCCCAATTTCTTTTTTTGAACACATTGTAAGAAGGCTTGGCCTCAAGAGTCGCTTGCATTGGGAATTTCTATGGCGGTGCCAGCGGGTTCTTCTTGGCGTCATTGCCGATTCAAGGGTTATGAGTTATCTTCCATCTACATTGGCTGCTGCTACGATGATCCATGTTATTAAAGAGATTGAGCCATTTAATGCAACTAAGTACATTAGTGAACTTCTGGGACTACTCAAGATTAGTGAGGAACAAGGGAACCAGTGCTACAAACTCTTGCTGAAATCATTAGTTTGYGAAGAAGGTATTACTGACKGTCTTCACCAGATGCACAAGCGCAAGCGCAAWCGCGAATCTGCCCCGAGTAGCCCGGGAGGTGTCATTGATGCTTCTTTCAGTTGTGASAGCTCAAACGATTTGTGGGCCGTTGCGGCATCGTCGGTTTCACATTCGATGGAGCCGCTGTTTAAGAGGAGCAGAGCTAAGGACCAGCAGATGAGACTGCCTTCTGTTAGTCGCGTGTCTATCGATGTTCTTAATAGCCCTCATTAA 1143 0.4926 MSPTTPSLLDTLLCQEEHDDTFDDTXNDASFHLNDNHHDESPSFCPAKLQSFPHPVLHDNDLFWEHDELASLISKEXETHAAAGNDDDHRDGLLDGLRVGPVGWITNVCAHYGFSALTTVLAVNYFDRFVTSLTFQRDKPWMTQLTAVACLSIAAKMEETHVPLLLDLQVEESRFLFEAKTIQRMELLVLSTLKWKMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCQRVLLGVIADSRVMSYLPSTLAAATMIHVIKEIEPFNATKYISELLGLLKISEEQGNQCYKLLLKSLVCEEGITDXLHQMHKRKRXRESAPSSPGGVIDASFSCXSSNDLWAVAASSVSHSMEPLFKRSRAKDQQMRLPSVSRVSIDVLNSPH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2808 380 Gene3D - 199 288 - -
Amo11g2808 380 PANTHER CYCLINS 39 364 IPR039361 -
Amo11g2808 380 SMART cyclin_7 103 191 IPR013763 -
Amo11g2808 380 Pfam Cyclin, C-terminal domain 200 298 IPR004367 -
Amo11g2808 380 SUPERFAMILY Cyclin-like 65 198 IPR036915 -
Amo11g2808 380 PANTHER CYCLIN-D3-2 39 364 - -
Amo11g2808 380 Pfam Cyclin, N-terminal domain 88 197 IPR006671 -
Amo11g2808 380 Gene3D - 89 198 - -
Amo11g2808 380 SMART Cyclin_C_2 200 322 IPR004367 -
Amo11g2808 380 CDD CYCLIN 97 190 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2808 Amo-Chr11 138397377 138399188 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2808 61 370 Core Cell Cycle Gene Families AT5G67260 52.244 6.77e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2808 K14505 - gmx:100785030 493.426