Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2753 ATGGATGATTCAACCTCAGATTGTCAGCTGAATCCAGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTTCTGAGTTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTTGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACATACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGTTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAATAG 462 0.4156 MDDSTSDCQLNPGEVDYEFESNEVSEFVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVWSTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMFKQHRELSMSIRRTIENNE* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2753 153 Pfam FAR1 DNA-binding domain 43 128 IPR004330 -
Amo11g2753 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2753 Amo-Chr11 137148467 137149404 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g2753 FAR1 1.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2753 - - adu:110280446 285.419