Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2735 ATGGCATTTTCACCCACTGAAAGAGGATCGATTACTACATTCACCAATCCAACACAAGGCGATGAACAATTCAATGTGGATGAATTAGACATTCAAGAACAAGTAGGGTGCAAGTTCGACAAAATTACCGATTTCGTTGTGACTAGAAAGGATGAGCTGGACGACGGACACCAATTGTCGGATCATAGTGGCATAGGTGAAGAGGAAATTCCAGTCGTAGGAATGAGTTTTGGTTCGTTGCCTCTCGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACAAATTTCGACAAGACGCGGAAGGAATTAAAGATACCGGTTAATCAATCTATTTACTGCACGCGCGAAGGTTATCGAGAATCTAGGGTGAACGCAGCAACTCGAGCAAATAAAATTACAGCCACGAGATGCAGAGCAAGGATGTATGTCGTGCTGGACAATGAGAATGAATGTTGGGTTATGTCTAGATTAGAACTGAGGCATTCTCACCCTTGTTCGGCTGAGAAAGCTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCTAACCATGACGTGGCTCGGAGTGATGAAAGCAACAACTTGATCAGGCATCTGTGTTCAGAGTTCTATAACGTTGTGCAAGAGTTTGTTGCTTGTGATGAGGAAGCAGCCATCTTGCGAGCTGCCCTTTGGGATGTAAAGTCCAAGCTGATTGATTACCGTGGTAGCATGCGTTCCACTAATGCTGTTGCGTCTCAGAATACCGTGCCCACACAGAGCACAGGCGGTGCGATTGTACATGACATTCAAGGACCCTCAAGAGTCAAAACCAAAGGACGGCCTAAAGGTAAGAGACTTGGAGCAGAGTTGGACAAGTCAATTAAGAAATCAATGCAAAAAAGGAATAGGAAATCACACCTGGATGAGGTTGACCTTCCATCAGATAATGATCATCATGGGTCCCTTAGTAAAAGATTTGAGGATTCTATTATGTGGAACTCATCGGAAGGTGGAGGATTCATGCACCTGTTGAACTCTTTTAGGCATATATAG 1065 0.4394 MAFSPTERGSITTFTNPTQGDEQFNVDELDIQEQVGCKFDKITDFVVTRKDELDDGHQLSDHSGIGEEEIPVVGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKELKIPVNQSIYCTREGYRESRVNAATRANKITATRCRARMYVVLDNENECWVMSRLELRHSHPCSAEKAVHYHEYRELTMHANHDVARSDESNNLIRHLCSEFYNVVQEFVACDEEAAILRAALWDVKSKLIDYRGSMRSTNAVASQNTVPTQSTGGAIVHDIQGPSRVKTKGRPKGKRLGAELDKSIKKSMQKRNRKSHLDEVDLPSDNDHHGSLSKRFEDSIMWNSSEGGGFMHLLNSFRHI* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2735 354 MobiDBLite consensus disorder prediction 255 270 - -
Amo11g2735 354 MobiDBLite consensus disorder prediction 255 326 - -
Amo11g2735 354 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Amo11g2735 354 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 216 - -
Amo11g2735 354 MobiDBLite consensus disorder prediction 286 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2735 Amo-Chr11 136908850 136912568 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g2735 FAR1 5.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2735 - - ahf:112730161 369.007