Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2713 ATGGATGATTCAACCTCAGATTGTCAGCTCAATCAGGGCGAAGTGGATTTTGAATTTGAATCGAACGAAGTTCCTGAGCCCCTCTCTGTTGTTGATGAGCAGCTTATTTCCAAGGTTGGAATGACCTTTAAAACCCTTGAAGATGCTGGAAAATTTTACAAGGACTATGCCAAGGATGTAGGTTTTTCTACTAGAGTTCGGAGCACAAATAAAAAGGGAAACGAAATTAAGAATCAATTGATCACATGTAGTAGAGAGGGAAAACGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCCACAGCTGGTTTAAATTGTTCTGCAAGAATTTATATACACACATTGAAGGATGTTTGTGCTTGGATCATTTCAAAGGTCATGCTGCATCATTCACACCCTTGCTGTCCAACTCAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCGTTCGTCGTACAATAGAGAATAATGAGGAGGTTGGGATGAAAAGCACACAAAGGAGCGAGAGCATGCATTTATTTTTTAACAAGTTTATTATCCGGAACAGCTCGCTTATTCAATTTTTCAAACAATACGATAATTGCCTCAGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTACAAATTTTCATACGGTCATACCATGTGCAATCAAATCCTCCATTGAAGCTCAGTTTCAAGATGTGTACACTCATCAAAAGTTTAGGGAAGTCCAAGCACAATTCAGAGGAAAGGCGAATTGCATCACTAGATTAATGAATTCCGCTCTAGGCTATTCAGTATACGAAGTTGGAGAACAAGTTTCCAGCTCAATATTCAACAAGTTTGTGGTTACTTACGACTCAGTAGCAGCAATGTCAATGCTTATTATTCGAGAAGAGAGGATATTCAGCCATGACGAGCTATTGTTGGAGCCAAGAAGCAAGAGGTTTGACGAATTGGTTTTTCGTTCGCAAAATATTTGCGAATTTGCATCAGAATCGGAGGAGCTGACTGCAATTCTGCACCGTGCGTACGATAACGTCATGGTTGAGATGGAATCATTGAAAGCCAAAAGGAAGGGGACATCTTCTTTATCTCACGAAGACGCCAACTTGGAATCCATTAACGATCTTCAAAGCCCTCCAAGGATTCGAACAAGAGGACGTCCAAAAAATAGGCTAGGTTCAAAGTTGGACAAACAGATTGCAAATGCCTCAAAGAAGAARAAAACGAAAGCTTTAAACGAGTTAAACCTCTTTGATGCTGCATCAGTCGTGCGTTCACATTCCAGCCAATATCAAGGACGTGTTATGAATTATCAGTTCAGGGAACCAGCAGTAGCGGATAACTCTTTGGGTGAACACCATTTGTATATAGAGGATGAAAATCCTCTTGAACATGAGAAAGATCCTTATAATTGA 1416 0.4047 MDDSTSDCQLNQGEVDFEFESNEVPEPLSVVDEQLISKVGMTFKTLEDAGKFYKDYAKDVGFSTRVRSTNKKGNEIKNQLITCSREGKRKSKISPTEKTNPTAGLNCSARIYIHTLKDVCAWIISKVMLHHSHPCCPTQAEMLKQHRELSMSVRRTIENNEEVGMKSTQRSESMHLFFNKFIIRNSSLIQFFKQYDNCLRSREQAERESDATNFHTVIPCAIKSSIEAQFQDVYTHQKFREVQAQFRGKANCITRLMNSALGYSVYEVGEQVSSSIFNKFVVTYDSVAAMSMLIIREERIFSHDELLLEPRSKRFDELVFRSQNICEFASESEELTAILHRAYDNVMVEMESLKAKRKGTSSLSHEDANLESINDLQSPPRIRTRGRPKNRLGSKLDKQIANASKKKKTKALNELNLFDAASVVRSHSSQYQGRVMNYQFREPAVADNSLGEHHLYIEDENPLEHEKDPYN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2713 471 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo11g2713 471 PANTHER OS03G0843700 PROTEIN 166 283 - -
Amo11g2713 471 PANTHER OS03G0843700 PROTEIN 29 148 - -
Amo11g2713 471 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 166 283 IPR031052 GO:0006355
Amo11g2713 471 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 148 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2713 Amo-Chr11 136407803 136412217 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g2713 FAR1 6.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2713 - - adu:110280503 426.402