Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2683 ATGAGCGGCGAAACCGTACCGGTAGAGGAAGCAGAAGCGATGGATTCGTCCGTCGTAGATGCCGACATAGATGGAGAAGCAGCAGTGAGGATTGTTGATGGGATAGGGTCCTTTGGCGCAATTGAATTTTCTTCCCTGATAGCCAAGGACGTCCTTACGACGAAGTTCACAAGCCTACAGGAAGCTTATGACTACTACAACGAATATGGTCGCATCAAGGGATTTTTGGTCAGGAGGTCCAAGGTGGGTTGCAGAACAAAGCAGGGGGCGGAGGGCGAAATCATTTGGCAGATATTCGTGTGCTCGAGGGAAGGAGAGCGATACGGGAAACACATGCAACGGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGTGGGTGTGAAGCCCGGATTAAGGTCCACGTTGATGATGCCAGCAGGCGATGGTTTGTTGAACAATTCTTCGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTCTGTCGCGGTCACACAGAGCAGTCAAGGAAGGTGATTTGCACCAAATCAATTCCATGAGGAAATCTGGGATGCGGGTGCCGACAATTTTCGGTGCCTTTGCCAATCAGTCAGGGGGATTCGAGACTGTTGGAATATGGACAGATAGCGTGGAAAAACATGGGTTGGAGGATCATCCGTGGATAGCGGACATGTATGCAAAGAAGCGTTCATGGTCTAATGCGCATATCCGAGGAAAATTCTTTGCAGGACTGAAGACGACATCGAGGTGCGAGGCTTTGAATATGCAGCTTGGGAAATTTATACACAACGGGTACAATCTGAGGGAGTTTGTGGAGCACTTCCAACACTATCTGGAATTCATGAGGAGAAGAGAACTAGTGGCAGACTACAAGTTTGCGTACGGCGAGCCTGTTGTAAAAATGAAACTCGAAGCCATTGAGCAGTTCGCTGCGAGCCTGCGACGATTTATACAAGAGAGGTCTTCGAACTATTTTGGGAGGTGCTGA 999 0.4945 MSGETVPVEEAEAMDSSVVDADIDGEAAVRIVDGIGSFGAIEFSSLIAKDVLTTKFTSLQEAYDYYNEYGRIKGFLVRRSKVGCRTKQGAEGEIIWQIFVCSREGERYGKHMQREDRKMDPRPITRCGCEARIKVHVDDASRRWFVEQFFDNHNHPMLDARFRGLSRSHRAVKEGDLHQINSMRKSGMRVPTIFGAFANQSGGFETVGIWTDSVEKHGLEDHPWIADMYAKKRSWSNAHIRGKFFAGLKTTSRCEALNMQLGKFIHNGYNLREFVEHFQHYLEFMRRRELVADYKFAYGEPVVKMKLEAIEQFAASLRRFIQERSSNYFGRC* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2683 332 PANTHER OS02G0262500 PROTEIN 50 211 - -
Amo11g2683 332 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 211 IPR031052 GO:0006355
Amo11g2683 332 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 210 315 IPR031052 GO:0006355
Amo11g2683 332 Pfam FAR1 DNA-binding domain 64 158 IPR004330 -
Amo11g2683 332 PANTHER OS02G0262500 PROTEIN 210 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2683 Amo-Chr11 135055891 135057374 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g2683 FAR1 7.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2683 - - aip:107615234 424.861