Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2668 ATGCGGGGATCTTATAACAAAAACCTGTTCTTGTACCACCTCACTGTCATCACAAGAACCCCATCACCCTCATTTCTGATCCCTTCCCCTTTCCGTGCTCCCAATTACAGCACAGTCACAAAAACCCCGGAAATACAATCCTTTACGGTGAATTACCTCGTCAAAAAGTGTGGGTTCCTCCCAGATTCCGCTCTTCAGGCTTCAAAATACGTCCTCTTTAAGAGTCCCGAGAAACCCGACTCAGTCATCGCACTCTTCAGGAGCTTCGGTTTCTCAGATTTGCAGATTCACAATGTCATTCAGAAATCGCCCAGGGTTCTCCTCAGCAAGCCCAAAGAGACCATCTTGCCCAAGCTCCAGTTCCTCATCTCCAAAGGTTTTTCAAAATCACAACTTGCCCGCATCATCGATCTCAACCCTCTAATCTTGCAAAGAAGCTTAGAGAGACACCTAATCCCCACTTTCGATTTGTTGAACAATTTCCTTCGTTCTGAAGAAAGGACCGTTGCTTCTATTTTACATTCTGTCCAAATTTTAACTTCTTCAACGTCGCATGAAAATCTTAATTTGCTGGTTGATTTAGGGGTCCGTGAGAGAAGCATGGCAAGGCTACTTCACCAATGGCCTTGGTTGCTTCGATTCAATTCTGCAGGCCTTAAGAGTATTGTAGATGAAGTCATTAAAATGGGGGTTGATCCCGCCAAGGCTAATTTTGTTCCTGCATTGTATGCTAAGCTGCTTCCAAAGTCCATGTGGGATAGGAAAGTTAAGTTGTACAAGAGGTTTGGATTAACTGATGACAACATTCGTGAGGCGTTTGTCAAGAACCCTTTCTGTATGCTGAAATCTGTGCAGAAAATTGAGGCCTGCATTGAATTCTTTGTCAAAGAACTCGGTTGGAAGCCCCTTGATGTCACCAATTATCCGCTTCTTCTCTCGCTGAATTTGGAGAAAAGGGTTGTTCCCAGGGCTGCTGTCTTGAAGATTCTTATGGCCAATGGTGTCATTAAGAGTGGTAGGAATTTGTTTGCATACTGTGTTTCGGAAGAGACGTTCTTTAAGAATTATCTGAATCGTGATAAGAATCATGCTCGCGACTTATTGAAGTTGTATCATGAGAAAATGAATCTTCCAGTAATGGATAGTAAATTGATGTCTTGA 1161 0.4307 MRGSYNKNLFLYHLTVITRTPSPSFLIPSPFRAPNYSTVTKTPEIQSFTVNYLVKKCGFLPDSALQASKYVLFKSPEKPDSVIALFRSFGFSDLQIHNVIQKSPRVLLSKPKETILPKLQFLISKGFSKSQLARIIDLNPLILQRSLERHLIPTFDLLNNFLRSEERTVASILHSVQILTSSTSHENLNLLVDLGVRERSMARLLHQWPWLLRFNSAGLKSIVDEVIKMGVDPAKANFVPALYAKLLPKSMWDRKVKLYKRFGLTDDNIREAFVKNPFCMLKSVQKIEACIEFFVKELGWKPLDVTNYPLLLSLNLEKRVVPRAAVLKILMANGVIKSGRNLFAYCVSEETFFKNYLNRDKNHARDLLKLYHEKMNLPVMDSKLMS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2668 386 PANTHER CGI-12 PROTEIN-RELATED 42 377 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 42 377 - -
Amo11g2668 386 Pfam mTERF 185 338 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 Pfam mTERF 84 288 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 SMART mt_12 202 232 IPR003690 GO:0003690|GO:0006355
Amo11g2668 386 Gene3D Transcription termination factor 3, mitochondrial 56 184 IPR038538 -
Amo11g2668 386 Gene3D Transcription termination factor 3, mitochondrial 185 369 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2668 Amo-Chr11 134888613 134890403 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo11g2668 mTERF 2.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2668 K15032 - pvy:116121303 266.159