Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2664 ATGCCCTCGAATTCATTTTGTTCACAACACCAACAACTACAACTACTACTTCCTTCTTCATCTCTTGTTTCTATTATATGCTTTCTCTCTGTCACTCTCGACTTCATCTTCTTCTTAAAGATTCCAATCAGATCCCTCCACAGAATCACTGTTACGCCTTCAATTCGCAATTTCAGTTCTCTACGATCGATTATGGCCCCTTCCAAAAAATCCAAAAGTGTAAATAAGAGGTTTCCTAATGTTCGTGAAGCTGCTTCGAGTAAAGAGAAAAATGCAGAAAATGCTAGCAAGAATAAGCAGAAGGCAAGTCCTGGCGCTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGGCCACAATGGAGCAAGGAGGAACTTGAGCATTTCTATGAAGCTTACCGTAAATATGGAAAAGACTGGAAGAAGGTTTCTCTTGCAGTACGTAATAGATCCGTGGAAATGGTAGAAGCTTTGTACACAATGAACAGGGCATACTTATCTCTTCCAGAGGGCACTGCTTCTGTTGTTGGACTGATAGCAATGATGACGGATCATTATAGTGTACTGGGAGGAAGTGACAGTGAAAAGGAGAGCAATGAAGATGCAGAAGTATCTAAAAGGTCTCAAAAACGTTTGCGAAGAAAACAAATGAATGACCATAAAACATTAGAGGGACCCTTTTCAGATCATTCTCAATCACAATCTGTTGCATCAGGTGATGGTTGCTTGTTGCTGTTGAAGACTAGGAATTCTGGGCTTACTCCTCATGCTGTCAGAAAACGGACTCCTCGAGTACCTATTTCACATTCCATTGGTAAAGATAATGCAGAGAAGTTATTTTCATCTGCCAGACAGGGGCGCAAACAAATGGTTGATACTAATGATGTTACTCATAAGATTGCATTAGCATTGGCCGAGGCTTCACAAAGAGGTGGCTCCTCAAAAATTTCTGCGTCTCCAAACAAGAGAGCAGCGCCATCGCCTAGTAAGAAAAGTGGGAAGAAGGTTAAATCAGAAATAGCTGGATCCAAGTTTTGCAGTTCTGATTTGGATGGGGGTAGCTCTGAATTGAGTTTAGGAAGCACAGAAGGAGACAATGGAGATTATTCTAGAAAAACAGTTAATTGGATAAGTAGGGAAAATACTGGAAAAGGAAGGAATCGAGAAAAGAGAGTAAAACACACTGGGAACAATTTAGAACCTGAGGAAAATTTAAACATGCATTTGGATGAGATAAAGGAAGCCTCAAGTGGGACAGATGATGGTAAAAATCTGAATTTTATCAAATCGAATTTTAGCACTGATTTTGCAAATGCAAAGAATCCAAGTCCCTCTTCTTACAAGGGTTCAAAGAAGAGAAGTAAAAAACTACAGGTTGAGAAAGATGAAGCTTCGGCTTTTGATGCTCTGAAAACTTTGGCTGATCTGTCTTTGATGATGCCTGTTACGAATGCTGACAGTGAGTCATCAGCACAGGTCAGAGAAGGAAACCATGATGTTGAGGAGTCTAAAGTGAAAATGCATAAGGCAACTAAGATTGAAAGAACTGCTTCAAGTGCATTAGGCAAGATCTTCTCTGAYGGAGCTGCTATTCCTGAAGGGGAGGGTGTGSACCAGCTTAATGCAGGAATCAGGAAAAGGAAACAGAAATCTTTTAGCCTAAACAATGATGAAACACATACTGATTCTCACCTCAGTGGCTCCCAGAAAACCAAGGATACTGATGAGGTCAAGAAATCAATGGTTAAAGGTAAGCGATCATCTGTTTCTACAACATATCCAAGACAACCAAAGKTAGTTAAATCCCCGGGAAAGATGTCTTCAAGTGGTAATGACAAAAGAGAAGGGGATGATTCAACTTCATCTCCCATAAAGGTTTCATCTGCTAACCAAGTCGGTCAAGTAAACAAAGGAAGGCCTAGAAGAAAAATGGGAAAACCAAAACCAATGGYAGAAGGAGATCCAGTGKTGTCTGGAAATATTTTCAGTAGTCAGCATAATAAATCCTGTGCTTCGGTCCAGAATAGTTCCTCTAGCCCCAAGGGAAAGCTTATTAACTGCCTGTCTTCACATCAAGCACGGAGATGGTGCACTTTTGAATGGTTTTATAGTGCCATCGATTACCCATGGTTTTCAAAGAGGGAGTTCGTGGAGTACTTGGACCATGTTGGACTGGGTCATGTTCCTAGATTGACTCGTATYGAGTGGGGAGTCATTAGAAGTTCCCTTGGCAAACCGCGGAGATTTTCAGAGCAATTTTTGATAGAAGAAAAACAGAAGCTTAATCAATACCGAGAATCTGTTAGATCACATTATGCTGAAGTTCTTGCTGGTACCAAGGAAGGCCTTCCTACTGATTTGGCTCGGCCATTAATTGTTGGCCAGCGAGTTATTGCTATTCATCCGAAGACAAGAGAGATTCATAATGGAAGTATACTAACTGTTGACCATTGTCGGTGTCTGGTTCAGTTTGACCAGCGTGAACTCGGGGCTGAATTTGTTATGGATATAGATTGCATGCCTATGTATCCATTTGAAAATATGCCTACATCTATGGCAAGACACAACATTGCTCATTGTAGAATAAACGAGACCTTTAATGATCTCCGACTTAATGGAAAACTGAAACAAGAAATTATTGCTGATCACACAATATTGTCCCCTAGTGAGAATATAGATACTACTAAAGGTCTTCACATATTGCCCACTAAGCATGGAAGCAGTACTTTATCAAATCAGGGAGTTTCACCAAATTCCAAATCACAAGTGAAAGCTATGTGCAATCAGATTTGTAATGCTCAACAGGCACCAAGTTTGCAACCTTTGCCTTTTGAACATGTTCATTCAAAAGAAGCTGACATATCGGCTATTTCAGAGTTGACTCGCGCTCTTGACAAGAAGGAACTTGTGATGTCTGAACTGAAGGTCATGAACGATGGGGTTTCAGAAAGCCAGAAATATGGAGACAACTCATTGAAAGATTCAGAGCCTTTTAAGAGGAGTTATGCTTCACTGATAAAGCATTTAACTGAAGTAAATGAGCAGGTTTCTTCTGCTTTGTTTCGCCTGAGGCAACGCAACACATATCAAGGWAGCACCACAGAATTATCACTAAAGCCCATAGCTAATTATGATGACCCTGGTGGTCAAGCTAGCTCCTCCAATTGTTCAGCATGTCATAACCAAGAATCTATACCTCTTGGCCATATAGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCCCGAGCAATGGTTGTTCAAGCTACACAGGCAATGTCAATATTTATGAAGACAGATAGTAAGGTTGAAAAGATCGAGGATGCAATAAATTTTATCAATAATCAGCTTTCAGTGGATGACCCTGCTGCTCCAGCCACAAATTCTCTGCCTGCTGATTCAATTCACGTCACTCTGGCTTCTCAGGATCAATTGACAGGAAACACATTAAATCCCTCAGTAAATTGTCATGCACAAGATGCCGAATTTAACAGTTCATCTGACCAAAATGAAATGAAAATTCCTTCAGAACTCATATCTCATTGTCTAGCTACACTGCTCATGATTCAGAAGTGCACGGAACGACAGTTYCCACCAGCTGATGTTGCTCAGGTACTAGATTCCGCTGTCACGAGTCTGCAGCCATTTTGCTCAAAGAACCTTCCAATATATGGGGAGATACAGAAATGCATGGGTATCATAAGAAACCAGATACTGGCACTCATACCAACTTAG 3729 0.4063 MPSNSFCSQHQQLQLLLPSSSLVSIICFLSVTLDFIFFLKIPIRSLHRITVTPSIRNFSSLRSIMAPSKKSKSVNKRFPNVREAASSKEKNAENASKNKQKASPGAQKKRKLADMLGPQWSKEELEHFYEAYRKYGKDWKKVSLAVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSEKESNEDAEVSKRSQKRLRRKQMNDHKTLEGPFSDHSQSQSVASGDGCLLLLKTRNSGLTPHAVRKRTPRVPISHSIGKDNAEKLFSSARQGRKQMVDTNDVTHKIALALAEASQRGGSSKISASPNKRAAPSPSKKSGKKVKSEIAGSKFCSSDLDGGSSELSLGSTEGDNGDYSRKTVNWISRENTGKGRNREKRVKHTGNNLEPEENLNMHLDEIKEASSGTDDGKNLNFIKSNFSTDFANAKNPSPSSYKGSKKRSKKLQVEKDEASAFDALKTLADLSLMMPVTNADSESSAQVREGNHDVEESKVKMHKATKIERTASSALGKIFSDGAAIPEGEGVXQLNAGIRKRKQKSFSLNNDETHTDSHLSGSQKTKDTDEVKKSMVKGKRSSVSTTYPRQPKXVKSPGKMSSSGNDKREGDDSTSSPIKVSSANQVGQVNKGRPRRKMGKPKPMXEGDPVXSGNIFSSQHNKSCASVQNSSSSPKGKLINCLSSHQARRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGKPRRFSEQFLIEEKQKLNQYRESVRSHYAEVLAGTKEGLPTDLARPLIVGQRVIAIHPKTREIHNGSILTVDHCRCLVQFDQRELGAEFVMDIDCMPMYPFENMPTSMARHNIAHCRINETFNDLRLNGKLKQEIIADHTILSPSENIDTTKGLHILPTKHGSSTLSNQGVSPNSKSQVKAMCNQICNAQQAPSLQPLPFEHVHSKEADISAISELTRALDKKELVMSELKVMNDGVSESQKYGDNSLKDSEPFKRSYASLIKHLTEVNEQVSSALFRLRQRNTYQGSTTELSLKPIANYDDPGGQASSSNCSACHNQESIPLGHIAEIVESSRRKARAMVVQATQAMSIFMKTDSKVEKIEDAINFINNQLSVDDPAAPATNSLPADSIHVTLASQDQLTGNTLNPSVNCHAQDAEFNSSSDQNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQVLDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALIPT* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2664 1242 MobiDBLite consensus disorder prediction 187 234 - -
Amo11g2664 1242 SUPERFAMILY Homeodomain-like 116 163 IPR009057 -
Amo11g2664 1242 SMART DIRP_2 701 802 IPR033471 -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 620 634 - -
Amo11g2664 1242 ProSiteProfiles SANT domain profile. 115 152 IPR017884 -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 189 207 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 583 606 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 484 504 - -
Amo11g2664 1242 SMART sant 116 164 IPR001005 -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 310 400 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 75 113 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 347 380 - -
Amo11g2664 1242 Pfam Myb-like DNA-binding domain 119 154 IPR001005 -
Amo11g2664 1242 CDD SANT 120 154 IPR001005 -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 381 400 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 549 582 - -
Amo11g2664 1242 Pfam DIRP 700 801 IPR033471 -
Amo11g2664 1242 PANTHER LIN-9 65 1242 IPR010561 GO:0006351|GO:0017053
Amo11g2664 1242 Gene3D - 57 172 - -
Amo11g2664 1242 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 65 1242 IPR028306 -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 310 325 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 657 675 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 82 96 - -
Amo11g2664 1242 MobiDBLite consensus disorder prediction 540 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2664 Amo-Chr11 134826432 134837776 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo11g2664 DIRP 5.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2664 - - adu:107464346 2232.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2664 11 134826432 134837776 Amo11g2664 11 134826432 134837776 ECH
Amo01g3499 01 107630471 107641766 Amo11g2664 11 134826432 134837776 hybridization