Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2617 ATGGAATCGCGAATTGCCGGTGGCAGCAGCAGCTGCCACCAGTACCACCAAATTCAGCCGGAGGCTTCGACGTCGTCGTTCTGGCAACCGCCGGAGCCTAGTCGGATCTTCGATGAGTTGCCGGAAGCCACCATTATATCCGTGTCTCGGCCAGAGGCCGCCGACATTACCCCCGCTCTCCTATCTTACACCATTCTTTTTCGCTACAGACAGTTCAAGTGGCAGCTGGTGAAGAAAGCTTCCCAAGTGTTTTATTTACATTTTATGTTAAAGAAGCGCGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCATGTTAAAGACTGGCTTCAAAATCTAGGAATAGGAGACCTTGCAGCTATGGTGCACATTGATGATGAAGCTGACGATGAAGTCATGCCTTTAAATAATCATCATGATGAAAGTGTTAAAGAAAGAGATGTTCCATCTAGTGCTGCTCTACCAATTCTGCGGCCAGCTTTAGGAACACAAGAGACTACAGCAGACAGGGCAAAGATTGCGATGCAGGGGTATCTCAATCACTTTTTGGGAAATATAACTATTGTTAACTCGAGAGAGGTTTGCAAGTTTCTGGGGGTATCAAAGTTATCCTTTTTACCTGAATATGGTTCCAAGCTACATGAAGATTATGTGATGGTGATGCATCTCCCAAAATTTTCAAAGGATGATAATTCCAGAAAGTGTTGTTTGTCTGATTGTTTTAGTTGTTGTAATGATAACTGGCAAAAGGTTTGGGCAGTACTGAAACCTGGGTTCTTAGCACTGCTAGCAGATCCTTTTGATGTACAACCTTTGGACATTATTGCTTTTGATGTACTACCTTCCTCCGATGGGAATGTGGATCATCGTCAATCACTGGCACAAGAAATGAAGGATCGAAATCCCTTGCGCCATTCGTTTAAGGTCAGAAAGGTAACTTGTGGAAACCGGTGTATTAGAGTTAGAGTAAAAAGTAGTGCTAAAGTTAAAGATTGGGTCACTGCAATTAATGATGCTGGACTCAAGCCCCCTGAAGGATGGTGTCATCCCCACCGCTATGGTTCTTATGCTCCTCCAAGAGGCTTAATCAAAGATGGAAGTCAGGCTCAATGGTTTGTAGATGGTCGTGCCGCATTTGAGGCAATTGCTTCTTCAATCAAGGATGCAAAATCAGAGATATTTATTTGTGGCTGGTGGTTGTGCCCAGAACTGTATCTAAAGCGCCCTTTTCATGCTCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAGAGCTAAGCAAGGGGTCCAGATTTTCGTTCTTATCTACAAAGAGGTAGCCCTTGCTTTGAAAATCAATAGTTCTTATAGCAGGAGAAAGCTTCTTAGCATTCACGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAGAAACTTGTGATTGTTGACCACCAGATTTGCTTTATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGACACCCCTGAACATAAAGTTGGGGATCTCCCTCCTATTATCTGGCCAGGAAAGGACTATTATAATCCAAGGGAATCTGAACCAAATTCATGGGAAGATATGATGAAAGATGAATTGGACCGTGGAAAATACCCGCGTATGCCTTGGCATGATGTTCATTGTGCACTTTGGGGGCCCCCTTGTCGTGACATAGCGAGGCACTTTGTTCAGAGATGGAATTTTGCCAAGAGGAACAAAGCTCCAAATGAGCAAGCGATACCATTACTTATGCCTCGGCATCATATGGTTATTCCACATTACTTGGGAAAGGACACAGAGGTGAAGATTGAATACAAGAATAATGACAACAACAGAACCATGATGAGGGAAGACTCCTTTAGCTCAGCAACTGATGATATTCCTTTACTATTGCCTCGGGAGTCTGGTGGGCTCAATACTTCTGAAGAAGACCCCAAAAGTGGGTCAAGCTCATTTTCATATCTGCGTGACCAGACTGCTAGTAGGCTCAGCAGCGGTCTTTCTTTCTCTTTATGGAAGACCAGAGTTGAACCACTTAGTTCTGATACACCAATGAAGGGATTTGTAGACAATCTTGATGGTGTGCAAGTGCGTCATCAAAGGAAAATGTCTCTGGATAGAGTATCTCTTGGTGATGTCCAGAATTCAGATCAAGAGTGGTGGAAAACACCAGGACCTGGTGAGCATGGAGGTTTTGCAGAAGACTCTGGACAAGTTGGCCCTCGTGTTTCGTGTCGTTGTCAGGTTATTAGGAGTGTCACTCAATGGTCAGCTGGAACAAGCCAAACCGAAGAAAGCATCCACAAGGCATATTGCTCTCTAATTGAGAAGGCAGAATATTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCACGGGATGATGTAATACGAAATCGTGTATCAGAAGCTTTATATCAACGCATTAGGCGAGCTTACGACGATAAGAAAACTTTCAGGGTTATAATTGTCATACCTCTCCTTCCTGGCTTCCAGGGGGGCCTGGACGACAGTGGTGCAGCCTCTGTGAGAGCCATAATGCATTGGCAGTATAGAACTATCTGCCGAGGACAGAATTCTATATTACATAATTTGTATGAACTTCTTGGTTCAAAAATGCATGACTATATCTCTTTCTTCGGCCTCAGGGCACATGGTAGACTTTGTGAAAGTGTTCCCTTGGTAACCAGCCAGATCTATGTTCACAGCAAAATCATGATTATTGATGATTGTACATGTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAGTTATAGAAGACAGAGAACTGATTGATTCCTATATGGATGGAAAGCCTTGGAAGGCAGGAAAATTCTCCTTGACTCTCCGATTGTCACTATGGTCTGAGCATTTAGGTCTTGGAGCAGGAGAGGAAAATACTAAAATTTACCAGGATGTCTTTTCTTGTGTTCCTAATGATGTGATACACAACAGATATGCTTTCCGACAAAGCGTTGCTTTTTGGAAAGACAAGATAGGTCACAGTACTATTGATCTAGGGATAGCTCCAAAAAAGTTAGAAAATCATCATGACGGAGTTACTGAGAGCATTGATCCCATGGAGAGGTTAGCGTCAGTGAAAGGTCACCTTGTTAGTTTCCCCCTGGAGTTCATGAGCTTAGAAAATCTAAGACCTGCTTTCAATGAAGGCGAGTTCTATGCTGCCCAAGTTTTCCATTGA 3273 0.4308 MESRIAGGSSSCHQYHQIQPEASTSSFWQPPEPSRIFDELPEATIISVSRPEAADITPALLSYTILFRYRQFKWQLVKKASQVFYLHFMLKKRAFIEEIHEKQEHVKDWLQNLGIGDLAAMVHIDDEADDEVMPLNNHHDESVKERDVPSSAALPILRPALGTQETTADRAKIAMQGYLNHFLGNITIVNSREVCKFLGVSKLSFLPEYGSKLHEDYVMVMHLPKFSKDDNSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDVQPLDIIAFDVLPSSDGNVDHRQSLAQEMKDRNPLRHSFKVRKVTCGNRCIRVRVKSSAKVKDWVTAINDAGLKPPEGWCHPHRYGSYAPPRGLIKDGSQAQWFVDGRAAFEAIASSIKDAKSEIFICGWWLCPELYLKRPFHAHASSRLDNLLEARAKQGVQIFVLIYKEVALALKINSSYSRRKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPEHKVGDLPPIIWPGKDYYNPRESEPNSWEDMMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNFAKRNKAPNEQAIPLLMPRHHMVIPHYLGKDTEVKIEYKNNDNNRTMMREDSFSSATDDIPLLLPRESGGLNTSEEDPKSGSSSFSYLRDQTASRLSSGLSFSLWKTRVEPLSSDTPMKGFVDNLDGVQVRHQRKMSLDRVSLGDVQNSDQEWWKTPGPGEHGGFAEDSGQVGPRVSCRCQVIRSVTQWSAGTSQTEESIHKAYCSLIEKAEYFIYIENQFFISGLSRDDVIRNRVSEALYQRIRRAYDDKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKMHDYISFFGLRAHGRLCESVPLVTSQIYVHSKIMIIDDCTCLIGSANINDRSLLGSRDSEIGVVIEDRELIDSYMDGKPWKAGKFSLTLRLSLWSEHLGLGAGEENTKIYQDVFSCVPNDVIHNRYAFRQSVAFWKDKIGHSTIDLGIAPKKLENHHDGVTESIDPMERLASVKGHLVSFPLEFMSLENLRPAFNEGEFYAAQVFH* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2617 1090 Pfam Phospholipase D Active site motif 476 503 IPR001736 GO:0003824
Amo11g2617 1090 MobiDBLite consensus disorder prediction 641 663 - -
Amo11g2617 1090 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 476 503 IPR001736 GO:0003824
Amo11g2617 1090 SUPERFAMILY Phospholipase D/nuclease 332 596 - -
Amo11g2617 1090 SMART pld_4 909 936 IPR001736 GO:0003824
Amo11g2617 1090 SMART pld_4 476 503 IPR001736 GO:0003824
Amo11g2617 1090 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 909 936 IPR001736 GO:0003824
Amo11g2617 1090 CDD PH_PLD 189 339 - -
Amo11g2617 1090 PANTHER PHOSPHOLIPASE 25 986 - -
Amo11g2617 1090 SUPERFAMILY PH domain-like 244 339 - -
Amo11g2617 1090 PANTHER PHOSPHOLIPASE D 25 986 IPR015679 -
Amo11g2617 1090 PIRSF PLD_euk 682 989 IPR016555 GO:0004630|GO:0006654|GO:0048017
Amo11g2617 1090 PIRSF PLD_euk 45 626 IPR016555 GO:0004630|GO:0006654|GO:0048017
Amo11g2617 1090 PIRSF PLD_euk 986 1090 IPR016555 GO:0004630|GO:0006654|GO:0048017
Amo11g2617 1090 Pfam PLD-like domain 782 958 IPR025202 -
Amo11g2617 1090 Gene3D - 228 340 IPR011993 -
Amo11g2617 1090 PANTHER PHOSPHOLIPASE D 988 1087 IPR015679 -
Amo11g2617 1090 CDD PLDc_vPLD1_2_yPLD_like_1 369 514 - -
Amo11g2617 1090 PANTHER PHOSPHOLIPASE 988 1087 - -
Amo11g2617 1090 Gene3D Endonuclease Chain A 362 617 - -
Amo11g2617 1090 Gene3D Endonuclease Chain A 742 969 - -
Amo11g2617 1090 CDD PLDc_vPLD1_2_yPLD_like_2 769 953 - -
Amo11g2617 1090 SUPERFAMILY Phospholipase D/nuclease 729 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2617 Amo-Chr11 133999656 134008049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2617 9 988 Phospholipase D Gene Family (Wang group) AT3G16785 68.548 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2617 K01115 - gmx:100780514 1719.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2617 11 133999656 134008049 Amo11g2617 11 133999656 134008049 ECH