Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2609 ATGGTGATTGAGGATGTCGATATATCACCGGCAAGAGCGGCGGATGTGGTCACGGAGACGGTTGCGAGCAAAGCGGAGCAGGCGGCAGGGCTGGGAATTCTGCTGCAGATCATGATGCTGGTGCTGGCCTTCGTGCTTGGCCATGTCCTCCGCCGCAAGAAGATTTACGTGGTTCCGGAGGCCAGCGCCTCCCTCCTCATCGGCCTGCTTGTCGGCGTCCTCGCCAACATCTCCCACACTCAGACCAGCATCAGAGCCTGCCTCGCACCGCAACCTTTCTTCTCTAATTTTGGAGCCATTATCACCTTTGCTATATTCGGTACCTTTCTAGCTTCTGTTGTAACTGGTGTCCTTGTTTTCCTTGGTGGATTTATACACCTCGTGTACGGACTACCTTTCGTTGAGTGCCTAATGTTTGGTGCTCTTATCTCTGCAACTGATCCAGTTACCGTTCTCTCCATATTTCAGGAGCTTGGCACTGATGTCAATTTGTATGCCCTGGTTTTTGGAGAGTCTGTTCTGAATGATGCTATGGCTATTTCATTGTACAGAACAATGTCACTGGTTAAAACTCATCCATCTGGACAGAACTTATTCATGGTGGTTGTTAGTTCTTGGAGACTTTTGTTGGGTCGATGTCTGCTGGTAAGGAAGTTTTCGGTTTTATCTAGCCTTCAGAACTTGGAGAGCTGTCTTTTTGTACTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTTGGCTTGTCTGGTATTGTATCAATATTGTTCACGGGAATGGTCATGAAGCACTACACGTATTCAAACTTGTCTAGAAGTTCTCAGAGATTTGTCTCTTCTTTCTTCGAGTTAATATCATCATTAGCAGAGACATTTGTATTTATATACATGGGGATTGATATTGCCATGGAGAAACATAGCTGGTCACATGTTGGATTTATTTGCTTCTCAGTTATATCCATTGGAATTGCAAGGTATTTGAGCTCCAGACTTCGAGGAGCAATGGCCTTTGCCCTTGCTCTACAATCAGTTCATGATCTTCCTGAAGGACATGGGCAGACCATATTCACTGCAACTACAGCAATTGTCATGTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTTTAGAAGTTGTAGGTGGTGAAATTAATAGCAAGGAGAGCCCTTTGCCTTCAGGTGAGATCACAAAGTTTGAGGAAAGCAATGGCAGCTATGTTTCTCCTCAGAAGGAAGAATTATCACCAGGGAGCAAAATCAAGTTGAAGCTTCGAGAATTAAACAGTGCTGCATCTTTTAAAGCATTAGATAAGAACTACCTCACCCCATTCTTTACAAGTCAAAACGAAGATGATGAAGAAGAAGAAGTGGTTGAGCTTCTGGCTTCTAGAAGTGCGGGATTCCATGATCCCCAGCAAGAACATTATTCTCCTTTAGGATAA 1455 0.4474 MVIEDVDISPARAADVVTETVASKAEQAAGLGILLQIMMLVLAFVLGHVLRRKKIYVVPEASASLLIGLLVGVLANISHTQTSIRACLAPQPFFSNFGAIITFAIFGTFLASVVTGVLVFLGGFIHLVYGLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNLFMVVVSSWRLLLGRCLLVRKFSVLSSLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSSFFELISSLAETFVFIYMGIDIAMEKHSWSHVGFICFSVISIGIARYLSSRLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVMLTVLLIGGSTGTMLEALEVVGGEINSKESPLPSGEITKFEESNGSYVSPQKEELSPGSKIKLKLRELNSAASFKALDKNYLTPFFTSQNEDDEEEEVVELLASRSAGFHDPQQEHYSPLG* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2609 484 Gene3D - 133 185 - -
Amo11g2609 484 PRINTS Na+/H+ exchanger signature 100 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo11g2609 484 PRINTS Na+/H+ exchanger signature 140 150 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo11g2609 484 PRINTS Na+/H+ exchanger signature 85 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Amo11g2609 484 PANTHER SODIUM/HYDROGEN EXCHANGER 6 329 459 - -
Amo11g2609 484 Pfam Sodium/hydrogen exchanger family 91 328 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo11g2609 484 PANTHER SODIUM/HYDROGEN EXCHANGER 329 459 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo11g2609 484 PANTHER SODIUM/HYDROGEN EXCHANGER 6 15 325 - -
Amo11g2609 484 PANTHER SODIUM/HYDROGEN EXCHANGER 15 325 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2609 Amo-Chr11 133742480 133746937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2609 23 311 Antiporters AT3G05030 31.498 8.72e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2609 K14724 - gmx:100810105 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3768 01 110900469 110903822 Amo11g2609 11 133742480 133746937 hybridization
Amo11g2609 11 133742480 133746937 Amo14g0826 14 11451485 11453140 PCT