Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2586 ATGAAGATAATGATGATTGCAGCTAAGGCAATGGAAGCGGATGCGAAAGAAGTGCTTTTGAGCTCGCCTCCGCCGGCGGAGTCCGCCGTTCCAGGGGCTGTCAGCGGGAGAGCGCCAACACGCATAGCTTACATCCTCAAAGTCGCGAGTGGCTTCGACGACCTGGACGGCGTCACCCCCTACGCGCGGCGCCGCCAGCTTGGGATCTGCATCTTAAGCAGCAATGACACCGTCACCAGCGTTACCATCTGGGAGCCCACGGTCCCCGGCTCCGTTGTCACTCTCCAAGGAAGGTTCGAGATACTGTCGCACTCTAGCTCGTTCCTCCCGCCGCCTGCTCCTCCTGGCGCGACAAGCCTCAGAATATACTTTCTCGCATCCAGCGACAAACTGAGAAAACTATAG 405 0.5827 MKIMMIAAKAMEADAKEVLLSSPPPAESAVPGAVSGRAPTRIAYILKVASGFDDLDGVTPYARRRQLGICILSSNDTVTSVTIWEPTVPGSVVTLQGRFEILSHSSSFLPPPAPPGATSLRIYFLASSDKLRKL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2586 134 Pfam Plants and Prokaryotes Conserved (PCC) domain 44 110 IPR005175 -
Amo11g2586 134 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 38 124 - -
Amo11g2586 134 ProSiteProfiles PPC domain profile profile. 37 134 IPR005175 -
Amo11g2586 134 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 124 IPR014476 GO:0003680
Amo11g2586 134 SUPERFAMILY AF0104/ALDC/Ptd012-like 44 119 - -
Amo11g2586 134 CDD DUF296 44 117 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2586 Amo-Chr11 133437475 133437921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2586 38 124 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 62.069 3.78e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2586 - - sspl:121806871 112.079