Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2563 ATGTTGAAAAGAAGCAACAGTTTTGGAGCCATGAGGATGCTATGCTGGGGGTTTGGGTTTATAGGGTTCATGTTTGTGAAATTGGTACAAGGATTTGAGAATGGTAATGTCACAGATATGCTGTATTTCAATAATAACAGACCTTTGATGGTTGGTCTTACTCTTATTTATGGTGCTGCCGCCAAAGGAGCTGTATGTCTTGATGGATCTTTACCAGGTTACCACTTCCACCGCGGATATGGCGCCGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAAATGTCAGAAATTGCATTTATAGTAAGAAGACGCGGCATGGTTCGTCGGCGTTTATGGAAAAACAGATACCATTTGTTGGGATATTAAGCAACAAAGCTTGGGAAAACCCAGATTTCTACAATTGGAATAGAATAAAAATTCGTTATTGTGATGGTGCATCATTTACTGGAGACAGTCAAAATGAGCGAGCAGGGTTGTTTTTCAGAGGGCAACGCATCTGGCTCGCTGCTATGGAAGATCTAATGTCGAAAGGAATGCGCTATGCTAAGCAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTGGCAACTATTCTACATTGTGATGAATTCAAGGAAATGTTYCCAAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTGTTCCTTGACGCTGTTGATGTATCCGGCCATCGCAGTTTGAGGAATTTGTTTGGAGGTGTGGTTGCCTTACAGGGAGCACAAAGAAACCTTCCGAGGACTTGTACCAGTCGCCTCAATCCAATTTTGTGCTTTTTCCCTCAGCACTCAATTGCCAGTGTTAAGGCACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCAAGTCTAGCTCCGCCATCTGCTGACTATCACTGGAATTGGTATGATTGCAGAAAAAATTACGCGCGATGCAGCGCGCCTCAGATGCAATATCTGCAAGGTTTTCGGAATCAGATGCTAAGAGCTGTAAGAAGATTCTCGAAGTTGCGTAAAAACGGGTTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCCGAAAGACAGGATACATGGTTTGCTCGCGACTCTCCCCATATTGGAAATCGAGGGATAGCACAGTCTGTTGGGAACTGGTATTTCGATCGAGTTCAAGTTCAGGCCATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTGA 1245 0.4361 MLKRSNSFGAMRMLCWGFGFIGFMFVKLVQGFENGNVTDMLYFNNNRPLMVGLTLIYGAAAKGAVCLDGSLPGYHFHRGYGAGSNSWLIQLEGGGWCGNVRNCIYSKKTRHGSSAFMEKQIPFVGILSNKAWENPDFYNWNRIKIRYCDGASFTGDSQNERAGLFFRGQRIWLAAMEDLMSKGMRYAKQALLSGCSAGGLATILHCDEFKEMFPRTTRVKCLSDAGLFLDAVDVSGHRSLRNLFGGVVALQGAQRNLPRTCTSRLNPILCFFPQHSIASVKAPLFLLNAAYDTWQIQASLAPPSADYHWNWYDCRKNYARCSAPQMQYLQGFRNQMLRAVRRFSKLRKNGLFINSCFAHCQSERQDTWFARDSPHIGNRGIAQSVGNWYFDRVQVQAIGCPYPCDKTCHNLVFN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2563 414 Pfam Pectinacetylesterase 46 393 IPR004963 GO:0016787
Amo11g2563 414 PANTHER PECTIN ACETYLESTERASE 18 413 - -
Amo11g2563 414 PANTHER NOTUM-RELATED 18 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2563 Amo-Chr11 133019719 133023349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2563 43 413 Carbohydrate Esterase AT1G57590 69.272 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2563 K19882 - gmx:100791571 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2563 11 133019719 133023349 Amo11g2563 11 133019719 133023349 ECH
Amo11g2563 11 133019719 133023349 Amo19g1336 19 27271464 27275274 ECH