Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2543 ATGACGTCCTCTACACGGCTTGGTGAGCTCCTCTATTCAGCAAACTCCGACAAAGCCAATGACGATGACCAAGATGACCTCCAATGCGCAATATGCTCCGACGAGGCCAATGAAGAAGATGACGGGCAGCTCCTCTATGCAGCAAGTTCCGGCAAGGTAAGCGACGAAGACGATGAGCAGCTCCTCAGCGCAGCGATCATTGACGGGGCCAACAACGGAGACGACAAGTTCACTACCGCCAAAATTGACTACCAAGATCCCATCGTGCTCCCCACCTGTCCACGCCAGCGCACCGCCGAGGAGCTCGACCGCGACCGCAACCGTCTTGGTGGCGGCTTCAGGAACTACGGCAATGACCGCGCCAACAGAAGCTCCAGTGATGGTGATGATACCTCCAATTCGGTTCCAACAGCGGTTCTGGTGGTCTTGGGTTTGAAAGAGAGAGGAAGTGAGAGGAGTGAGGGTGGTGGTGGGAGACCTAGGCTTGTTTTGCAACCTCGTACAGCGCCTGTGAACAATGAGAGCCAGAAGGGTGCTGGTAATGGTAATGGTAATGTGGTGAAACCAAAGGGTCCAAGCCCATTCGGCGAGGTGAGACCGAGGGAAGAGGTGCTGGTGGAGAAGGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCATGAAGATTAAGGAGGCTGTTGAGAAAAAAGAGAGTTTTGAAAAGAGGGGTTTTGGTTCTGGCAATGGACGTGGTTCACCAAAATAA 750 0.5347 MTSSTRLGELLYSANSDKANDDDQDDLQCAICSDEANEEDDGQLLYAASSGKVSDEDDEQLLSAAIIDGANNGDDKFTTAKIDYQDPIVLPTCPRQRTAEELDRDRNRLGGGFRNYGNDRANRSSSDGDDTSNSVPTAVLVVLGLKERGSERSEGGGGRPRLVLQPRTAPVNNESQKGAGNGNGNVVKPKGPSPFGEVRPREEVLVEKGQDWKKIDEQLESMKIKEAVEKKESFEKRGFGSGNGRGSPK* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2543 249 MobiDBLite consensus disorder prediction 93 203 - -
Amo11g2543 249 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 151 246 IPR010433 GO:0003743
Amo11g2543 249 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 80 124 IPR010433 GO:0003743
Amo11g2543 249 MobiDBLite consensus disorder prediction 227 249 - -
Amo11g2543 249 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 80 124 - -
Amo11g2543 249 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 151 246 - -
Amo11g2543 249 Pfam Plant specific eukaryotic initiation factor 4B 15 134 IPR010433 GO:0003743
Amo11g2543 249 Pfam Plant specific eukaryotic initiation factor 4B 155 224 IPR010433 GO:0003743
Amo11g2543 249 MobiDBLite consensus disorder prediction 118 138 - -
Amo11g2543 249 MobiDBLite consensus disorder prediction 168 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2543 Amo-Chr11 132627262 132632457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2543 156 245 Eukaryotic Initiation Factors Gene Family AT4G38710 59.375 1.10e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2543 - - aip:107612529 313.538