Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2505 ATGAATTGGAGAGTAGGAATTTTCAATCTTGCAGATTGTAGCTGTCCTTGCTGCTCAATGAAAGCTTTTGTTTATTATGGAATCACGATTTTTCAGGAGATTGCTTTCTTCGATGTTACTCGAACGGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGCCGCAACTACCAATGTTTCTGAGGCCATGAAGAACCTAGCAACAGCACTTATGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGCCTTTGACTGTTGTGCCTGTAATTTCTGTTGCTGTCTGTAAATTTAGGCATTTGCTGCGTGAACTATCTCACAAAATTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGAGAAATCATTTGGTGCCATAAGAATAGTAAGATCTTTTGCTCAAGAAGATTATGAAATTTCATGCTACTTTGAGAAAGTTAGTGAGACACACAGCCTTGGCCTTAAGCAAGCTAAAGTCGTTGGACTCTTTTCTGGAGGCCTTAATGCAGCGTCCACACTTTCTGTTATCGTAGCAGTGGGATCTTCTATATCTTCTATATCTTTTTTGTTAATCACAACCTGTCTAATAAGACTAAATGGCTACCGGAAACCTGGTTTGATTGCATTGTTTGATGTTGATGTCACTCTTATAGCCCCAAGGAAGGTATTTGTTCTTCTTGAGCCAATGGCATTAGTATTGTATAGATAA 735 0.3891 MNWRVGIFNLADCSCPCCSMKAFVYYGITIFQEIAFFDVTRTGEILSRLSEDTQIIKNAATTNVSEAMKNLATALMGLSFMFATSWKLTLLPLTVVPVISVAVCKFRHLLRELSHKIQTAAAVASSIAEKSFGAIRIVRSFAQEDYEISCYFEKVSETHSLGLKQAKVVGLFSGGLNAASTLSVIVAVGSSISSISFLLITTCLIRLNGYRKPGLIALFDVDVTLIAPRKVFVLLEPMALVLYR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2505 244 SUPERFAMILY ABC transporter transmembrane region 31 201 IPR036640 GO:0005524|GO:0016021
Amo11g2505 244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 32 189 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo11g2505 244 Gene3D ABC transporter type 1, transmembrane domain 20 207 IPR036640 GO:0005524|GO:0016021
Amo11g2505 244 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 30 188 IPR039421 -
Amo11g2505 244 Pfam ABC transporter transmembrane region 31 193 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo11g2505 244 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 30 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2505 Amo-Chr11 131208762 131210018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2505 25 171 Calmodulin-binding Proteins AT2G36910 29.333 4.78e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2505 - - ahf:112722681 350.903