Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2494 ATGATGATGATGATGATGGTCAAGCCAAGAAAAGGAGAGGAACAAACCATCCTGGAGGATATCCATATCAAGAAAATTTACGGCATATCTGATTTTGGATTAGTAAAATGGCTTCCATCTCAATGGAGTCATCATTCAATTGGCCCAATAGAAGGGACATTTGGTCATTTGGCACCAGAATATTATCTACATGAAGTTGTGGATGAGAAGGCAGATGTATTTGCTTTTGGTGTGTTCTTGCTTGAACTCATTTCTGCAAGAAAATTGGTTGATGGATGGCTCTCACCAAAGCTTGCATAA 300 0.39 MMMMMMVKPRKGEEQTILEDIHIKKIYGISDFGLVKWLPSQWSHHSIGPIEGTFGHLAPEYYLHEVVDEKADVFAFGVFLLELISARKLVDGWLSPKLA* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2494 99 Pfam Protein tyrosine and serine/threonine kinase 24 85 IPR001245 GO:0004672|GO:0006468
Amo11g2494 99 Gene3D Transferase(Phosphotransferase) domain 1 6 98 - -
Amo11g2494 99 PANTHER OS04G0654600 PROTEIN 29 92 - -
Amo11g2494 99 SUPERFAMILY Protein kinase-like (PK-like) 28 92 IPR011009 -
Amo11g2494 99 PANTHER OS08G0249100 PROTEIN 29 92 - -
Amo11g2494 99 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2494 Amo-Chr11 130949546 130951633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2494 29 91 Receptor kinase-like Gene Family AT1G69270 50.794 3.25e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo11g2494 PK_Tyr_Ser-Thr 7.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2494 - - ahf:112697971 126.331