Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2477 ATGGCTGGTGGAAGGAGGAGGAAGCACCATTTCAGTAGAATCCATGCATTCACTTGTGGTAAAGCTTCAATGAAAGATGAACATTCTCTTATAGGTGGACCTGGTTTCTCAAGGAAAGTTTATTGCAATGATCCTGAACGTGTAGAAGCTAGTCTTCAAAATTATGGTGATAATTATGTTAGGACTACTAAGTATACATTAGCAACTTTTCTACCAAAATCATTGTTTGAGCAGTTTAGGAGAGTTGCAAATTTCTACTTCCTTGTGGTGGCAATTTTGTCCTTCTTTCCGGTTGCGCCATACTCGGCGATCAGCAATGTTGTTCCTTTATTGGTTGTGGTTGCTGCTACAATGGCCAAAGAGTTCATCGAAGATTATAGGCGAAAACAGCAGGATATTGAGATGAATAACAGAAAGGTTAAGGTACATCGCGGAAATGGTGTTTTTGAAATATCTAAATGGAGAAATTTAAGGGTTGGAGACATAGTGAAGGTGGAAAAGGATGAATTTTTCCCTGCTGATCTCATCTTACTTTCGTCGAGCTATGACGACGCGATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTGAAGCTGAAACAAGCACTGGAAACAACTTCAAAGTTGCAGGAAGACTCAAACTACCAAAATTTCAAGGCTATTATCAAATGTGAAGATCCGAATGCGAATTTGTACACATTTGTAGGCAGCATGGAGTATGAGGATCAGCAGTATCCTCTTGCACCTCAGCAGATACTGCTTCGCGACTCGAAGCTGAGGAACACAGATTTTGTGTTTGGTGTGGTAATCTTCACTGGTCATGATACAAAGGTTATGCAGAATGCAACAGAACCACCATCAAAAAGAAGCAAAGTTGAGAGAAGAATGGATAAGATTATCTACTTCTTGTTCTTTGTTTTGATTTTGCTTCTTTTATTGGGTCCATATTCTTTGGGATTTGGACAAACGAAGACATTGATGATGGAAGAATGA 1002 0.3932 MAGGRRRKHHFSRIHAFTCGKASMKDEHSLIGGPGFSRKVYCNDPERVEASLQNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVVAILSFFPVAPYSAISNVVPLLVVVAATMAKEFIEDYRRKQQDIEMNNRKVKVHRGNGVFEISKWRNLRVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQALETTSKLQEDSNYQNFKAIIKCEDPNANLYTFVGSMEYEDQQYPLAPQQILLRDSKLRNTDFVFGVVIFTGHDTKVMQNATEPPSKRSKVERRMDKIIYFLFFVLILLLLLGPYSLGFGQTKTLMMEE* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2477 333 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 319 IPR023298 -
Amo11g2477 333 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 210 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo11g2477 333 Pfam E1-E2 ATPase 135 316 - -
Amo11g2477 333 SUPERFAMILY Calcium ATPase, transduction domain A 137 285 IPR008250 -
Amo11g2477 333 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 320 - -
Amo11g2477 333 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Amo11g2477 333 Gene3D - 105 287 - -
Amo11g2477 333 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2477 Amo-Chr11 130433069 130434801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2477 1 326 Primary Pumps ATPases AT1G68710 65.758 4.85e-159 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2477 K01530 K14802 gmx:100796405 554.288