Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2440 ATGGGGTGTTCATTTTCTGGTTTGAACGCACTTTACGATTCCGTTAACGGAGGCGGAGATGTTTGGATCAACGAGAACCGGTTCCGTATCGTCAGGCAGCTCGGTGAAGGTGGCAACGCCTATGTCTTCCTCGTCAAGGACGTTCCCGCCGACAACGTCTCCGGCGGTTTCTCCTCCAAGCTCAAACAGTCCTCTCACATTTCCGAGGACGGAACATATGCTATGAAAAAGGTCCTCATCAAGAGCAATGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCATGTTTCATCACTGTTCAACCACCCAAATCTGCTCCCGCTTCTCGATCATGCAATCATTTCTGTCAAGCCTACTCCACAAAAATCTTGGAACCACGAGGCATACTTGTTATTTCCACTTCATTTGGATGGAACACTGCTAGATAATACCAAGACAATGCAAGCCAGGAAGGAATCCTTTCCTACCTCGGATGTTCTTCAAATCTTTCGACAGCTTTGTGCAGGACTCAAGCATATGCATGGTTTAGATACTCCATATGCTCATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAAGGACAACCGCCTCTTGCCATACTCATGGATTTTGGCAGTGCTCGTCCTGCCAGGAAGCACATTGGTTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCAGCTGAACACTGTTCTGCCCCTTTCCGAGCTCCGGAGCTGTGGGAATGCCCAAGCCAAGGTGATATAGACGAGAGGACTGATGTTTGGTCACTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCATTTGAATATGCACTTGATGAGCCTGATGGAGACCTCCGATCAGCTGTTTTAAATGCTAAAATCAAATGGCCAACTGAACGTAAGTCTCAATATCCAGACGCTCTTCATCAGTTTGTATCGTGGATGCTTCAGCCCCAGATTGCTGTGCGGCCCCGGATAGATGATATTGTTATTCATGTTGATAAGTTGATTGCAAAGTTCTCTGGTTGA 1029 0.4684 MGCSFSGLNALYDSVNGGGDVWINENRFRIVRQLGEGGNAYVFLVKDVPADNVSGGFSSKLKQSSHISEDGTYAMKKVLIKSNEQLELVREEIHVSSLFNHPNLLPLLDHAIISVKPTPQKSWNHEAYLLFPLHLDGTLLDNTKTMQARKESFPTSDVLQIFRQLCAGLKHMHGLDTPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKHIGSRSEALQLQEWAAEHCSAPFRAPELWECPSQGDIDERTDVWSLGCTLYAIMYGVSPFEYALDEPDGDLRSAVLNAKIKWPTERKSQYPDALHQFVSWMLQPQIAVRPRIDDIVIHVDKLIAKFSG* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2440 342 PANTHER - 1 341 - -
Amo11g2440 342 ProSiteProfiles Protein kinase domain profile. 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2440 342 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 341 - -
Amo11g2440 342 Pfam Protein kinase domain 56 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2440 342 SMART serkin_6 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2440 342 CDD STKc_16 27 338 - -
Amo11g2440 342 Gene3D Transferase(Phosphotransferase) domain 1 135 340 - -
Amo11g2440 342 SUPERFAMILY Protein kinase-like (PK-like) 21 332 IPR011009 -
Amo11g2440 342 Gene3D Phosphorylase Kinase; domain 1 13 132 - -
Amo11g2440 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2440 Amo-Chr11 129486929 129491100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2440 23 332 MAP Kinase Kinase Kinase Kinase AT4G24100 22.397 5.52e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Amo11g2440 Pkinase 8.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2440 K08856 - gmx:100803659 592.038