Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2341 ATGAAGCCTCTTTGGTTACCTGCCAGTACCAGTGGATCTGTTGTAGCAACCTTACTCCTGTTACTGTTCTCTTGCACCACATTCACTTCCACAGAAGCTTATGATGCACTTGATCCAACTGCCAATATAACAATCAAATGGGATGTCATAACCTGGACTGGAGATGGCTATATTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCATATCCAGGCGCCGGGATGGACCTTAGGGTGGACATGGGCAAAAAGGGAAGTAATTTGGAACATGCTTGGAGGCCAAACCACAGAACAAGGGGATTGTTCAAGGTTCAAAGGGAGCATCCCACATTGCTGCAAGAAAGATCCAACTGTAGTGGATTTACTGCCAGGAGCACCTTACAATCAGCAGGTAGCAAATTGCTGCAAAGGCGGCGTCTTGAATGCGTGGGCTCAGGACCCTGAAACTGCAGTTGCTTCGTTCCAACTCATTGTCGGTTCGGCTGGAACAACTAACAAAACTGTTAGAGTGCCAAAAAATTTCACCTTGAGAGTGCCCGGTCCAGGTTATACTTGTGGCCCTGCAAAGATTGTGAGACCAACAAAATTTAGCACCAATGACAAGAGGAGAACCACTCAAGCCATGATGACTTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACTCCAACTTGCTGTGTTTCTCTCTCATCATTCTATAATAATACAATAGTAAATTGCCCAACTTGTACCTGTGGCTGTCAAAACAAAACAGAACCTGGAAGCTGTGTAGATCCAAAGTCTCCGCATTTAGCTTCAGTCGTTTCACCACCAAGCAGAGCTTTGAATCCACCTCTAGTTCAGTGTACAAGCCATATGTGTCCGATTCGAGTGCACTGGCACGTCAAGCTCCAATACAAAGAGTACTGGAGGATCAAGATCACAGTCACAAATTTCAATTACAGAATGAACTATTCACAATGGAACCTTGTTGTTCAGCATCCCAATTTTGACAATGTGACACAGGTTTTCAGCTTTAACTACAAGCCACTGACACCTTATGAGGGCTTAAATGATACAGGTATGCTGTGGGGTGTGAAGTTCTACAATGATTTGTTGGTTTCAGCTGGAGCAGTTGGGAATGTGCAATCAGAACTGTTATTTAGGAAAGACAAATCAAGCTTCACATTTGATAAAGGATGGGCATTCCCAAGAAGGATCTATTTCAATGGAGACAACTGTGTCATGCCACCTCCAGATGCATATCCTTGGCTACCAAATGCAAGTTCAACACTAGTTCTCTCTTTGCTAAGTTCTCTCACTCGGATTCTGGCTTCTTTTCTAGTCTTATCATTTACATGTTAA 1359 0.4341 MKPLWLPASTSGSVVATLLLLLFSCTTFTSTEAYDALDPTANITIKWDVITWTGDGYIAVVTMYNFQQYRHIQAPGWTLGWTWAKREVIWNMLGGQTTEQGDCSRFKGSIPHCCKKDPTVVDLLPGAPYNQQVANCCKGGVLNAWAQDPETAVASFQLIVGSAGTTNKTVRVPKNFTLRVPGPGYTCGPAKIVRPTKFSTNDKRRTTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCTCGCQNKTEPGSCVDPKSPHLASVVSPPSRALNPPLVQCTSHMCPIRVHWHVKLQYKEYWRIKITVTNFNYRMNYSQWNLVVQHPNFDNVTQVFSFNYKPLTPYEGLNDTGMLWGVKFYNDLLVSAGAVGNVQSELLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSTLVLSLLSSLTRILASFLVLSFTC* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2341 452 PIRSF COBRA 9 452 IPR006918 GO:0010215|GO:0031225
Amo11g2341 452 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Amo11g2341 452 PANTHER PROTEIN COBRA 11 448 IPR006918 GO:0010215|GO:0031225
Amo11g2341 452 PANTHER COBRA-LIKE PROTEIN 11 448 - -
Amo11g2341 452 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2341 Amo-Chr11 125218279 125221393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2341 19 446 COBRA Gene Family AT3G02210 75.581 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2341 - - gmx:100811581 822.772