Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2328 ATGGCAGATGATCAATTTCGAGCAAGTGCAAATTGGTGGGATTCATCAAGAAACGTTGTGAGGTTTGAAAGCCGGGAATCGCAATCTGGACCTTGGCATGGCGTTGGTGATGATGAAATGAAGCTACCAATAAGATCTTCCACCATGGAAAATTCCATGTCTTCTTCTTCTTCTGCAGGCGCCTCATCAGGTAGGTCCTCTGTGGTGTTCCATGAGAGGCTTCAACAACAACAAAACTTGGATTCCCCAAATTTGAGCAACGACCCCAACTTGCATATGATGATGGGTTTGGGGCTTTCTTCTCACTCATCCATGGATTGGAATCAAGCATCTTTCATGAGAGCAGAAAAGACATCCGAGATGTTGCAGCAAGAAACAGGAATGGGATTGTCAAATAGAGGTTTCTCGTTGGATCAAACACAGTTCAGTCCTCAATACAGTTCCTGTTCCGGAGACAGCAACATCACAAGCCAACAACTATTATCCTCTAATTTTCAGATGGATTCTTCTTCTTCAGCGCCTTTATATTGTAACACTTCAATGCTACAAGGACTATTAGGACCTGAAAGCAATAATCAAGCACACCAAGGACCTATCAGTAATTTTCCATACTCAACGTGTTTGAACAGCAACAATAATAACAACCAATTGCATTTCACTAATAACGCCCCCTTCTGGAACGCTTCGGAGCCTGCGCCGGTTTCCATTAAAGATGCTCGATCCATCTTCTTCCCTTCATTGCACCAACCATTTTCGGCGCCAAGCTTCGATCAACAATCAAAGAATATGGTTGTTTTGCAGAATATATCTGAAGTAAGGGACTCAGGAGGTAGCATGTTGAAGAAAAGTGAGAATGAGCAATCATCAAAAAGGCCTAGAAACGAAACACCTCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGAGACAGAATCACTGCCCTACAGCAATTGGTTTCGCCTTTCGGAAAGACTGATACGGCATCGGTGCTCTCTGAGGCCACTGAATACATCAAATTCCTCCATGAGCAAGTGACTGTTTTAAGCACCCCATATATGAAGAGTGGAGCTCAAACACAGCATCACCAGAATTCTGGTAAATCAAAGGAAGCTGATGGACCAAAACAGGATCTAAGAAGCCGAGGGCTGTGTCTGGTGCCAATTTCAAGTACATTTCCAGTGACTCATGAACCCACAGTTGATTTTTGGACGCCAACATTTGGAGGAACTTATAGATAA 1248 0.4343 MADDQFRASANWWDSSRNVVRFESRESQSGPWHGVGDDEMKLPIRSSTMENSMSSSSSAGASSGRSSVVFHERLQQQQNLDSPNLSNDPNLHMMMGLGLSSHSSMDWNQASFMRAEKTSEMLQQETGMGLSNRGFSLDQTQFSPQYSSCSGDSNITSQQLLSSNFQMDSSSSAPLYCNTSMLQGLLGPESNNQAHQGPISNFPYSTCLNSNNNNNQLHFTNNAPFWNASEPAPVSIKDARSIFFPSLHQPFSAPSFDQQSKNMVVLQNISEVRDSGGSMLKKSENEQSSKRPRNETPPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEATEYIKFLHEQVTVLSTPYMKSGAQTQHHQNSGKSKEADGPKQDLRSRGLCLVPISSTFPVTHEPTVDFWTPTFGGTYR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2328 415 MobiDBLite consensus disorder prediction 274 304 - -
Amo11g2328 415 PANTHER TRANSCRIPTION FACTOR BHLH123 63 405 - -
Amo11g2328 415 MobiDBLite consensus disorder prediction 23 42 - -
Amo11g2328 415 MobiDBLite consensus disorder prediction 47 67 - -
Amo11g2328 415 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 405 - -
Amo11g2328 415 MobiDBLite consensus disorder prediction 277 291 - -
Amo11g2328 415 MobiDBLite consensus disorder prediction 358 380 - -
Amo11g2328 415 Gene3D - 305 368 IPR036638 GO:0046983
Amo11g2328 415 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 295 344 IPR011598 GO:0046983
Amo11g2328 415 CDD bHLH_AtbHLH_like 301 352 IPR045239 -
Amo11g2328 415 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 305 361 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2328 Amo-Chr11 124624010 124628210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2328 132 415 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.296 1.30e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2328 - - adu:107478336 624.394