Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2307 ATGAACGAATCAACTTCAAATCAGCTGAATGAGTGCGATTTTGATGATTATTCTGAAACGCATCAATTTGATAAGACCAGCTGTGTTGTGGACGAAAAATTTGTCCCAAATGTGGGAATGATTTTCAAGACCCTAAAAGAATCTAGAAAGTTCTACAAACATTATTCCAAACTTGCTGGTTTTTCCACCAAAATAAGGAACACGACTCGGGATGGAGACAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGATGTGGAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTTCGGCCATAATTTACGTACACATAATAAAGGATGTTGGTCTTTGGACAATTTCCAAAGTTGTTTTAAATCACTCACATCCTTGTTGTCCAGACCAGGCTGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTCGTACGTCGCACCATTGAAACCCACGAGGAAGCTGGAATCAGACCGAGTAAAACCTACCAATCATTTGTGGCAGCAGCTGGTAGCCACTGTGAACTAGCATGCACTGTTTTCGGTTCACCACAACTTATAAATTCAGCTCGGTTTGCAGAGATGTACGAGGATCAGCATATATGGATTCTGGTTTACTTGGATTACCACTTTTGGGCCGGAATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCGTTTTTCAACAAGTTCATCACAAAGAATAACTCCTTGAGACAATTCGTGAAGCAATACGACAATTGCCTCGCAAGCAGAGAGAGAATTCGATGCTGCAGATTTTCACACTGTGTACCGTGCGCAACAAAATCAGCAATAGAGGCACAATTTCAGCGTGTATATACCCATGAGAAGTTCAGGGAAGTTTAA 888 0.4122 MNESTSNQLNECDFDDYSETHQFDKTSCVVDEKFVPNVGMIFKTLKESRKFYKHYSKLAGFSTKIRNTTRDGDKIKNQLIVCSREGMWKSKISPTLKTNPSAGLNCSAIIYVHIIKDVGLWTISKVVLNHSHPCCPDQAEMLKQHRELSMFVRRTIETHEEAGIRPSKTYQSFVAAAGSHCELACTVFGSPQLINSARFAEMYEDQHIWILVYLDYHFWAGMRSTQRSESMHSFFNKFITKNNSLRQFVKQYDNCLASRERIRCCRFSHCVPCATKSAIEAQFQRVYTHEKFREV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2307 295 PANTHER OS03G0843700 PROTEIN 19 160 - -
Amo11g2307 295 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 160 IPR031052 GO:0006355
Amo11g2307 295 PANTHER OS03G0843700 PROTEIN 200 295 - -
Amo11g2307 295 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 295 IPR031052 GO:0006355
Amo11g2307 295 Pfam FAR1 DNA-binding domain 50 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2307 Amo-Chr11 124046799 124048822 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g2307 FAR1 1.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2307 - - aip:107614666 322.398