Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2300 ATGGAGAATGATGGCAAAGAGTCATATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGCAGATATAATTAATGCTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCGAAGACATACGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTAAATTTTATGCCAAATATGCCAAGTGCTATGGATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGTTAATGGCAACATTAATACAAGACAGTTAGTTTGCAATAAAGCGGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAGGGCAATTACTCGTGTCAACTGCAGGGTGAATATTCGGTTCATTCGTCACTATAGAACGGGCTATTTGAGACTGGTGGATTACCGTGCTCCCACATCTTTGGGGTCTTGA 495 0.4101 MENDGKESYKDGDQSEDLSVEYECSSDESDDMVDVTVDEAEADIINADGFEKLITDLTIEDIRGLVFDTESQVCKFYAKYAKCYGFVSRKDLKTVDVNGNINTRQLVCNKAGERHWKHLKRDNRQREHRAITRVNCRVNIRFIRHYRTGYLRLVDYRAPTSLGS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2300 164 MobiDBLite consensus disorder prediction 1 30 - -
Amo11g2300 164 MobiDBLite consensus disorder prediction 1 17 - -
Amo11g2300 164 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 143 - -
Amo11g2300 164 Pfam FAR1 DNA-binding domain 75 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2300 Amo-Chr11 123827490 123829268 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g2300 FAR1 5.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2300 - - aip:110266943 288.5