Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2224 ATGGGGCCTATGGCACTGTCTATAAGGGCACCTATGATGGCCAAGATGTTGCAGGAAATGGTTGCATATATTGCTAATACATTAATTTTCATCTTGAGTGGAGTTGTTATAGTTGAAGGAGTACTTGGTGATGACAGTGTCTTCCATCATGGAACATCATGGACCCACCTCTTACTTCTCTATGTTTATGTTCAAGTGTCGAAATGCATCGTAGTTGGTGCATTATTTCCCTTGCTAAGGTATTTTGGATATGGCTTGGACTGGAAAGAAGCTAGTATTCTAATCTGGTCAGGATTGCGAGGGGCAGTTGCCTTGTCACTTTCATTATCTGTCAAGCGTTCGAGTGGCCGATCACTTGAATTGACTCCAGAGACAGGAACACTGTTTATTTTTTTCACTGGTGGTATTGTGTTTTTAACACTTATAGTGAATGGTTCGACAACACAGTTCGTTTTACACTACCTTGACATGGACAAATTAACAGCTGCAAAGAAACGTATCCTTGATTTCACAAAGTATGAAATGTTGAACAAAACACTAGAAGATTTTGGTGAACTTGGAGATGATGAGGAACTTGGAGAATTTTAA 588 0.3963 MGPMALSIRAPMMAKMLQEMVAYIANTLIFILSGVVIVEGVLGDDSVFHHGTSWTHLLLLYVYVQVSKCIVVGALFPLLRYFGYGLDWKEASILIWSGLRGAVALSLSLSVKRSSGRSLELTPETGTLFIFFTGGIVFLTLIVNGSTTQFVLHYLDMDKLTAAKKRILDFTKYEMLNKTLEDFGELGDDEELGEF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2224 195 Pfam Sodium/hydrogen exchanger family 14 152 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo11g2224 195 PANTHER SODIUM/HYDROGEN EXCHANGER 18 193 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo11g2224 195 PANTHER - 18 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2224 Amo-Chr11 121998806 122002665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2224 19 193 Antiporters AT2G01980 73.143 1.15e-79 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2224 - - aip:107633272 352.829