Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2221 ATGGGAAATTGCATTCGAGAAAGTTCTGATATCACCACGCCATACCCAAATAATCCTATAGGTGCTACAAAAGGAGGTTATTATAGAAAAAGAAGCACATTATTGTTACCACCACCACCAATACAACATGTTGATGATGATGATTATGGTAAAGATGATGAGATTGTTCTAGCAACATCAAGATCTGAAGGCGACATACTACTAATTTCATCCCCTCATTTAAAATCCTTCACATTCAATAATCTTAAGAATGTTACTGGAAACTTTGATCATGAGAATCTAATAGGAGAAGGTGGATTTGGTTATGTTTATAAGGGATGGATTAATGCTCATTCATTTGACCCTACCTTTGGAATTGGAACTGTTGTTGTAGCTGTAAAGAAGCTTAAACCTCAAGGTTTTCAAGGTCATAAGGAGTGGTTGGTAGAGGGGAATGAAACGCTTCCTTGGACAACAAGAATGAAAGTTGCTATTGATGCTGCTAGAGGACTAACCTTCCTACATGAATCTGAGCAACAAGTCATCTACCGAGACTTCAAGACTTCTAACATTTTATTAGATTTGGAATTTAATGCAAAACTTTCTGATTTTGGATTGGCGAAAGCAGGGCCCATTGGTGATCGAAGTCATGTTTCTACTCAGGTCTTGGGCACTGTAGGTTATGCTGCTCCTGAATATATCCTTACAGGTCGGCTAACTACAAAATGTGACGTGTATAGTTTTGGAGTAGTACTATTGGAATTACTAACTGGACGGCGTGCAATTGAGGTAACAAAATCTGGGATGGAACATAATCTTGTGGAATGGGCAAAACCCTATTTGGGTGATAGGAGGAAGTTGTTCAGGATCATGGACACTAAGTTAGCAGGACAATACTCACAAAGGGCAGCTTATATAGTTGCTCTTCTTGCTTTGCAATGCATTAGTGAGCCCAAGTTCAGGCCTCAGATGCTTGATATTTTATCTACTTTAGAAAGGCTTCCACTAACTAGTAATAACCACTCACATAGGCCCAAGAATAGGCCCATATCATCAAGCCCAAGGTTACCCAGGGCCCCTAATCAATTGGTTTTGTCTCCTTTGAGATATAATAATAGTAATAATGATAATTATTATTCACCATACAACACCGGCAGGTCACCCCTCTTGCAACCCACGCATCATTATTAA 1170 0.3915 MGNCIRESSDITTPYPNNPIGATKGGYYRKRSTLLLPPPPIQHVDDDDYGKDDEIVLATSRSEGDILLISSPHLKSFTFNNLKNVTGNFDHENLIGEGGFGYVYKGWINAHSFDPTFGIGTVVVAVKKLKPQGFQGHKEWLVEGNETLPWTTRMKVAIDAARGLTFLHESEQQVIYRDFKTSNILLDLEFNAKLSDFGLAKAGPIGDRSHVSTQVLGTVGYAAPEYILTGRLTTKCDVYSFGVVLLELLTGRRAIEVTKSGMEHNLVEWAKPYLGDRRKLFRIMDTKLAGQYSQRAAYIVALLALQCISEPKFRPQMLDILSTLERLPLTSNNHSHRPKNRPISSSPRLPRAPNQLVLSPLRYNNSNNDNYYSPYNTGRSPLLQPTHHY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2221 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Amo11g2221 389 Gene3D Phosphorylase Kinase; domain 1 70 142 - -
Amo11g2221 389 PANTHER BNAC02G17010D PROTEIN 146 346 - -
Amo11g2221 389 MobiDBLite consensus disorder prediction 368 383 - -
Amo11g2221 389 ProSitePatterns Protein kinases ATP-binding region signature. 95 128 IPR017441 GO:0005524
Amo11g2221 389 PANTHER OS01G0588500 PROTEIN-RELATED 55 144 - -
Amo11g2221 389 PANTHER OS01G0588500 PROTEIN-RELATED 146 346 - -
Amo11g2221 389 SUPERFAMILY Protein kinase-like (PK-like) 75 357 IPR011009 -
Amo11g2221 389 PANTHER BNAC02G17010D PROTEIN 55 144 - -
Amo11g2221 389 Gene3D Transferase(Phosphotransferase) domain 1 143 344 - -
Amo11g2221 389 Pfam Protein kinase domain 152 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2221 389 MobiDBLite consensus disorder prediction 330 351 - -
Amo11g2221 389 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2221 389 MobiDBLite consensus disorder prediction 368 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2221 Amo-Chr11 121746025 121748786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2221 74 354 Receptor kinase-like Gene Family AT3G58690 42.470 8.24e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo11g2221 Pkinase 3.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2221 - - adu:107470619 478.018