Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2162 ATGCAAATGAAAATGGGTTATGGAGTGTGGGGTTTCTTCGTTTTGACCACATTTTTATTCTGTTCTTCCTCTCTTGCTCTCACCCAAGATGGTTTGGCCTTGTTGGAAATGAAAAGCACATTGAATGACACAAAAAATGTTCTCAGCAACTGGCAAGAGTTTGATGAATCTCCTTGTTCATGGACTGGTATCTCATGTTACCCTGATGCTGAACAAAGAGTTCGCTTCATAAATCTTCCATACATGCAACTTGGAGGAATCATATCTCCCAGCATTGGCAAACTCACTAGACTACAGAGATTGGCACTTCATGAGAACAGCTTGCATGGGATTATTCCTTATGAAATCACTAATTGTACTGAGCTAAGAGCGCTGTACTTAAGGGGTAACTATTTCCAAGGTGGAATACCAGCAGCTATTGGAAATCTATCTTTTCTAAATATACTTGATTTATCAAGCAACACATTGAAAGGTGCTATACCTTCCTCTATTGGCCGTCTCTCGCATTTGCAAGTTCTGAATTTGTCTACCAACTTCTTTTCTGGAGAAATCCCTGACATTGGAGTTCTAAGCACCTTTGGGAAGAACTCGTTTATTGGCAATCTAGATCTTTGTGGGCGACAAGTAGAAAAACCATGCCGAACATCACTTGGTTTCCCTGTGGTGCTACCCCATGCTGAAAGCGAAGAAGCTGCAGTCCCTCCCAAAAAATCTTCACATTACATTAAGTGGTTGGTAATTGGGGCAATGTCAACAATGGGAATTGCACTTGTGATAATCCTATCATTACTGTGGGTCCGGTTGCTATCGAAGAAGGAAAGAGCTGCTAGGAGATACACAGAAATGAAGAAACAAGTTGATTCAGAATCAAGAGCAAAACTTATTACATTCCATGGTGATCTTCCATACGCATCATCCGAGATCATAGAGAAGCTCGAGTCTCTTGATGCAGAGGATGTAGTAGGATCAGGAGGATTCGGGACTGTTTACCGGATGGTGATGAATGATTGTGGCACATTTGCTGTCAAGCGGATTGACAGAACTCGTGAAGGGTGTGATCAAGTGTTTGAGAGGGAACTTGAGATCTTGGGGAGCATCAAGCATATAAATCTGGTAAACCTACGCGGTTACTGCAGGCTCCCTTCTTCAAGGCTCCTTATATACGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAATACTCAACAACCACTGAATTGGAACGATCGCTTAAATATAGCCCTTGGTTCTGCCCGGGGTTTGGCGTACTTGCACCATGAGTGCTGTCCCAAAGTTGTACACCGCGACATCAAATCTAGCAACATTCTCCTTGATGAAAATTTGGAGCCTCGTATTTCTGATTTTGGTCTCGCAAGGCTTTTGGTCGATGAGGAGGCTCATGTCACCACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTACCTACAAAGTGGTAGAGCCACTGAAAAGTCAGATGTGTATAGCTTTGGAGTTCTATTGCTAGAACTTATAACTGGAAAGAGGCCTACTGATCCTTCCTTCGCAAAGCGAGGTTTAAATGTTGTTGGTTGGATGAACACATTGCTGAGAGAAAACAGATTGGATGATGTGGTAGACAAAAGATGCACCAATGTGGATGCAGGGACTCTTGAGGGGATTCTTGATATAGCAGCAAGATGCACGGATGGAAATGCGGAAGAACGTCCATCGATGAATGAGGTGTTACAGTTGCTTGAGCAAGAAGTTATGTCTCCTTGTCCTAGCGAATTCTACGAGTCTCAGTCAGATCGCTGA 1809 0.4317 MQMKMGYGVWGFFVLTTFLFCSSSLALTQDGLALLEMKSTLNDTKNVLSNWQEFDESPCSWTGISCYPDAEQRVRFINLPYMQLGGIISPSIGKLTRLQRLALHENSLHGIIPYEITNCTELRALYLRGNYFQGGIPAAIGNLSFLNILDLSSNTLKGAIPSSIGRLSHLQVLNLSTNFFSGEIPDIGVLSTFGKNSFIGNLDLCGRQVEKPCRTSLGFPVVLPHAESEEAAVPPKKSSHYIKWLVIGAMSTMGIALVIILSLLWVRLLSKKERAARRYTEMKKQVDSESRAKLITFHGDLPYASSEIIEKLESLDAEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRTREGCDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYLAMGSLDDLLHENTQQPLNWNDRLNIALGSARGLAYLHHECCPKVVHRDIKSSNILLDENLEPRISDFGLARLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELITGKRPTDPSFAKRGLNVVGWMNTLLRENRLDDVVDKRCTNVDAGTLEGILDIAARCTDGNAEERPSMNEVLQLLEQEVMSPCPSEFYESQSDR* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2162 602 SUPERFAMILY L domain-like 27 212 - -
Amo11g2162 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Amo11g2162 602 Gene3D Phosphorylase Kinase; domain 1 275 390 - -
Amo11g2162 602 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Amo11g2162 602 Pfam Protein kinase domain 318 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2162 602 Gene3D Ribonuclease Inhibitor 27 215 IPR032675 -
Amo11g2162 602 PANTHER LRR RECEPTOR-LIKE KINASE 5 601 - -
Amo11g2162 602 SMART serkin_6 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2162 602 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Amo11g2162 602 ProSiteProfiles Protein kinase domain profile. 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2162 602 SUPERFAMILY Protein kinase-like (PK-like) 301 584 IPR011009 -
Amo11g2162 602 Gene3D Transferase(Phosphotransferase) domain 1 391 593 - -
Amo11g2162 602 PANTHER RECEPTOR-LIKE PROTEIN 55 5 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2162 Amo-Chr11 118938607 118942472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2162 12 592 Receptor kinase-like Gene Family AT2G35620 50.171 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Amo11g2162 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2162 - - gmx:100797653 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2162 11 118938607 118942472 Amo11g2162 11 118938607 118942472 ECH
Amo01g4191 01 117430103 117433804 Amo11g2162 11 118938607 118942472 hybridization