Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2122 ATGACCCTTAAGGGTGGAACCACACAGGCCTGCGCTGCATGCAAATTTCAGAGAAGAAAGTGCACTCCTGAGTGTCTTCTTGCACCATACTTCCCTGCAGACCAACCAAAAGTGTTCCTTAATGTCCACAAGCTATTTGGGGTGAGCAACATTGTGAAAATATTAAAGGACGTGGATCCTAGTCAGAAGAAGAATGCTATGGAGTCCATCATCGTTCAAGCTAGTTATCGCGATAAGTACCCGGTTCGTGGTTGCGTGGAAGAAATTTGCAGGCTGCAAAACCAAATTTGGCTGCACGAAGAAGAGCTTCATGCTGTGTATCAGCAGCTTGAGATGTGCAGGCAACACCAACAGCAGCAGCACCAAGGGATTCATCACGTTGTTCCTGATGATCTTGCATCACAGTTAGAGTTGGGAATGGCGCCACGCGCTGCCAACAATGCTCTTCCGCTGTTTAATCACGCGCCACAGCCCCAGCAGCAGCAGCAGCAACAGGTTTACAATACTTCTGTGGCTGCTTTGCCTGTGTCACAGCAACATTCATATTCCAACAGCAACAGTGTGGATTATAACTCCCTTTACATTGAATCCAAGGAAAACAACAATAATGGAACAAATCCTTTGTGGGTACCTTATGCAAATAACAATGGAAGTCCCATAGCAATGCAGTCTCAGATGGTTACCTCACAGGCACTATCCATGCAGCAAGAAGCTGCTGGGGATTATGATGAGATGCATCCATTTTTCGAAACAATTGATGATAGGCAATCATATATTTATTCCAAGGAGGCTTATGAATCAAGCTCAGAAGAATCATTGAAAGATTCAAGAAAGTGCACCGAGCACGTTGCTGAGAATGAATTGAAGAGTGCTGCCGCATGCTTCAGCCTTACCAGTGTCAACTGA 906 0.4547 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKDVDPSQKKNAMESIIVQASYRDKYPVRGCVEEICRLQNQIWLHEEELHAVYQQLEMCRQHQQQQHQGIHHVVPDDLASQLELGMAPRAANNALPLFNHAPQPQQQQQQQVYNTSVAALPVSQQHSYSNSNSVDYNSLYIESKENNNNGTNPLWVPYANNNGSPIAMQSQMVTSQALSMQQEAAGDYDEMHPFFETIDDRQSYIYSKEAYESSSEESLKDSRKCTEHVAENELKSAAACFSLTSVN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2122 301 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Amo11g2122 301 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 277 - -
Amo11g2122 301 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 277 - -
Amo11g2122 301 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2122 Amo-Chr11 116617359 116618382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2122 1 264 AS2 family AT3G47870 40.594 1.39e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo11g2122 LOB 3.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2122 - - lang:109357116 377.867