Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2119 ATGTTCCAGGGATCTCCCCCTCCTCCGGCAACCGTCCAACGCCGATCCTCGTCGTCGCCGGAACGCAATTCCCTAAACCACATCGCCGGCGACGATCACGCCACCGCCGCCGCTCCCGATCCTCCTCCTCCGCAAACCACAAGGAGCAACCGCCCCTCTCGCGCGTGCGTCCTCCGCGCCGCTTCTCGCCTCTCAGGTCTCTTCGCCGCGGAGCCTTCACCGTCGATCCATCGGCGGAAGCCGAAGTCCGGGAAGAAAGAGCGCCGGCGGGCGGAGGAGGAGGAGGAGGAAGAAGAAGATGAGGAGTCGCCGCCGCTGTCGCCACAGCAGCAGCAATGCGCGAAGATCGTGACGCAGCTCGTGGAACCGCCGCTGTCGCCTTCGAGGATGCCGCGGTGGAACCTCCGGTGCATGTGGGAGTTGGCTTCGGTGCTCAATTTTTTGCATCTGTTTAGGCCACTTTTGAATATCTCACTTGAATTTTCTGCTGAAGAGTTCGAGACTGCACTTCTTACTCCCAATGACACTTTGAGTGATATACATATGCCTTTGCTTAAGGCAATCCCTCCTATTATACGCATGGCACTCACACGTGATACTTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGCGTCACATGGGACGGAAATTGAAGTATATAAATCGCTTGATCCAGGGGTTCGTCTTGTGATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGGAATTATATTGACAACTCCCTCAAACATGGTGTTAAACTCTCAACATTTCGTAAAGAGCGAATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAGTTGTTGGTCATAGGCTGTATCGAGAAACAAGAAAAACTGAAGTGATTCAAATGAAGAAAGGGAAACCAAGAGGTTCACTGGTTCTTTCTAATACATCATACCAGTGGGAATCTGTAGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGGACAGAGATCTCTGTGGGGAAAAAGCTAAAGATAGACATGCTTCCTGAAATTGAGAAAGTCCATAAGAGAAAGGAAAAGTTGCTGAAAAAGCAACAGAGAGAGGCCCTTCTTCTTGATAATTACATGATTGCTGATGGTCTTGCTACCGGACGTTCACTGCGTTATAGGAAGCCTGTTACCTACACTTTCGATGATTATGATAAGTCCATAAATGAGGCAATCAAAGAAACCAAACGGAAACAACCATCCCCAGAATCCATGCCCAAGAGAGAGTTGGTAGCAAAACCGGAAGCTTTTAGTAATGGTAAATGGAGTGGTCCTTCACATTCCCCTCAAAATCTGAATTTTGGTTGGTCATCTCCAAAATCACCTTACTCTGATGATGATGAGGAAGACCATATAACGGATCCACTTGATCGAACAAATCGTCGAAGACAGAGACCGAAGCGGTATTCAGATAAAGAGTTCCTTGATCCTGTATCAGATAATGATGCTGACTTTGACAGCGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAGTATCTCAAGAAGCGTAAGCAGAGAAGGAAGCATTCTAGTAGCTCCGAAGGAGATGAAGAATATCAGTGGGATGAAGATAATGTCGAAGAGGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGATGATGATGACGATGAAGATTCCTTGAGTATCAGTGAGGACAGTGACAAACCCCGCAAGTTCAAGGCATTGCGAGGCCGTACTACGAGGGATTCTAAACGCAGGCCTGTCAATGATTTTCAATCAGGTCTAAGGCGCAGTAAGAGGTCAACCCGAAACCGTGTAAATTACCGACAATACGAGGCGTCTGAATCAGAACAAGAGTTTATTAAACCTGAAAAGTCTAATACATCAGCTGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCCGACCGGAATGATGATGAAGACCAGGAAATGAAAGTAGAAGAGCAGCCTGCTACTTACCCCATAGTTGAAGAGAATGAACAAAATGCACCTCCCGAAAAGTCAAGTAGTCCTGGTCAGGAGGAAGTTGAGAGCATCGGAAAGCACCATTTCCTTGATTTGAACGAGCTCGCCCCTAGCTCGGGTTTCGATGATGGTCCAAATACAATAATGAAAGATGAAGACAATGAATGA 2256 0.4619 MFQGSPPPPATVQRRSSSSPERNSLNHIAGDDHATAAAPDPPPPQTTRSNRPSRACVLRAASRLSGLFAAEPSPSIHRRKPKSGKKERRRAEEEEEEEEDEESPPLSPQQQQCAKIVTQLVEPPLSPSRMPRWNLRCMWELASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLSDIHMPLLKAIPPIIRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGTEIEVYKSLDPGVRLVILKALCDIRVEQEDIRNYIDNSLKHGVKLSTFRKERIGGDSHGISYWYEDDPVVGHRLYRETRKTEVIQMKKGKPRGSLVLSNTSYQWESVATNFDEFQDVSEKLFSSKNRTEISVGKKLKIDMLPEIEKVHKRKEKLLKKQQREALLLDNYMIADGLATGRSLRYRKPVTYTFDDYDKSINEAIKETKRKQPSPESMPKRELVAKPEAFSNGKWSGPSHSPQNLNFGWSSPKSPYSDDDEEDHITDPLDRTNRRRQRPKRYSDKEFLDPVSDNDADFDSDDDIVGEAVYDEEYLKKRKQRRKHSSSSEGDEEYQWDEDNVEEEEEEEEEEEEEDDDDDEDSLSISEDSDKPRKFKALRGRTTRDSKRRPVNDFQSGLRRSKRSTRNRVNYRQYEASESEQEFIKPEKSNTSADHSDPSENGEYMMESEDSDRNDDEDQEMKVEEQPATYPIVEENEQNAPPEKSSSPGQEEVESIGKHHFLDLNELAPSSGFDDGPNTIMKDEDNE* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2119 751 MobiDBLite consensus disorder prediction 1 25 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 458 477 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 608 624 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 454 751 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 556 589 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 479 516 - -
Amo11g2119 751 Pfam DDT domain 143 188 IPR018501 -
Amo11g2119 751 Coils Coil 369 389 - -
Amo11g2119 751 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 234 264 IPR028942 -
Amo11g2119 751 MobiDBLite consensus disorder prediction 533 555 - -
Amo11g2119 751 PANTHER REMODELING AND SPACING FACTOR 1 32 750 IPR028938 GO:0006355|GO:0031213
Amo11g2119 751 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 32 750 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 1 113 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 517 532 - -
Amo11g2119 751 Coils Coil 555 585 - -
Amo11g2119 751 MobiDBLite consensus disorder prediction 637 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2119 Amo-Chr11 116475453 116482440 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Amo11g2119 DDT 5.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2119 - - aip:107610968 1135.55