Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2113 ATGAAGTTGATCGGTGTTGATAACGCCGCTTCCTCCACCGTCGACGGTGGACGGAAAGTGCTGGTCGGAGTGAAATTGGATACTCGGAGCCGGCAATTGCTGACGTGGGCGCTCGTTAAGGTGGCGGAGCCCGGCGACCACGTCATTGCACTCCACGTGCTCGACACCATCACTGAAGGCACGTCAACGCTGCTATCTCTCGTGAAGACCTTCAATTCCGTTCTCGCTGCATACGAAGGTTTCTGCAATTTAAAGCAGATTGATTTGAAACTGAAAGTGTGTAGAGGCTCTTCAACAAAGAAGGTTCTGGTGCAGGAAGCGACGTCATTTGGTGTGGAGACTGTGATTCTCGGAACTTCGGCGACGCAGCATACGATCCGGTCGTCGGTGTCGGTTGCTAAGTACTGCGCAAAGAAATTGCCAAAGTGTGTCTCTGTTTTCGCTATTGATAAGAATTGCAAAATTGCGTTCAGCAGAGAAGCTTCTAGAGCACACTGTGATCAAGAGAAATTACATGAAGATCCATTATTGTTGCTAAAATCGTTGGTGGCTTATGGTTCGAACTTGAAGAGTTGTGAGAGTTGTGCAGCGGTTTTGGCACCACAAGAGGGTTCTGAAACCAATGAACTGATGCAAGGTTTGCCAGAGGATCCTGAAAAAGACAATTCTCTGGCTTTAGTACCGATTCAGAAAGTTGATGATGCTCCTTCGCCTTGTTATTCAATTGTGGTGAGGGGTTCAAATCAGTCGAAACCTGGTTGGTCGTTTCTTCGCCACGTGTTCCACCCCCGAAAGCATACCTCTAAGTCATCACTGAAAAGCTCAATTATTTTCCAGCGCCCTTTGCGGCATCCCAGTTGGCATTTTTCAGCTGTAGTCCACCCAGATCAGAAACAGGCAAGTACTACTGAGAACAATGATCAGTCCAGTTATGCCCTGGATGGAGAGAGTGGTGCAATTGTGCCATTTGGATCTTCTGCCACCTTTCCTATTCCCTCCCTTTGTGGTGACTTGAGTAGTGTTTCTTTAGAATTGTTGGAGGGCTTACGAGAGAAGTACTTGTCTTCGTGTATATCGTATAGTTTGCAGCATCTTGCATCTGCAACAGCTAGCTTTTCACCTGAAAATTTGGTCGGCAGAGGTGGAAGTAGTTATGTATACAGAGGACATCTTCCAGATGGCAAGGAATTGGCCGTGAAGATTTTGAAACCATCTGTAGATGTGGTGAAGGAGTTTGTTCAGGAAATTGAGATACTTACAACTTTGGATCACAAGAATATAATATCTCTATCTGGATTTTGTTTCGAGGGAAATCATCTACTACTGGTTTATAATTTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCATGGCAATAAGAAAGACTCTGATGCATTTGGTTGGAAAGAGAGGTTTAAGGTGGCTGTGGGTGTGGCTGAGGCATTGGACTATCTGCACAACGGCTGTCCGCAGGCTGTGATCCATAGGGATGTAAAATCTTCAAATATCCTCCTTTCAGATGATTTTGAGCCGCAGCTCTCAGATTTTGGACTGGCTAGTTGGGGAACAACTTCTTCCCATGTTGCTTCTACTGATGTGGCTGGAACTTTTGGATACCTTGCACCTGAATATTTTATGCATGGTAGAGTGACGGACAAAATTGATGTATATGCATTTGGCGTTGTACTCCTTGAGCTTCTCTCGAATAAGAAGCCCATTGACAATGAATGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCTACACGAATTCTGAAAGATGGGAAGTTATCCCATTTGCTTGATCCAAACCTAGGCTGTGAATATGACCATTGCCAGATCAACAGAATGGTTTTGGCTGCTACTCTCTGCATCAGACGTGCATCTAGATTGCGACCTCAAATCAGTCTTATATTGAAACTTCTGCAAGGTGATGAAGAAGTGACGAAGTGGGCAGAACAAGAAGTTAACACACCAGTGGATCCTGATGGACTTTATGAGGAATCGGTTCCAACCAATATTCAGTCCCACCTTAACCTTGCTTTATTGGATGTGGAGGATGATGCAGTTTCTATCAGTAGCACCGAGCCGACTGTCTCATTGGAGGATTATTTACAGGGAAGATGGAGTCGCTCCTCAAGTTTCAACTAG 2151 0.4528 MKLIGVDNAASSTVDGGRKVLVGVKLDTRSRQLLTWALVKVAEPGDHVIALHVLDTITEGTSTLLSLVKTFNSVLAAYEGFCNLKQIDLKLKVCRGSSTKKVLVQEATSFGVETVILGTSATQHTIRSSVSVAKYCAKKLPKCVSVFAIDKNCKIAFSREASRAHCDQEKLHEDPLLLLKSLVAYGSNLKSCESCAAVLAPQEGSETNELMQGLPEDPEKDNSLALVPIQKVDDAPSPCYSIVVRGSNQSKPGWSFLRHVFHPRKHTSKSSLKSSIIFQRPLRHPSWHFSAVVHPDQKQASTTENNDQSSYALDGESGAIVPFGSSATFPIPSLCGDLSSVSLELLEGLREKYLSSCISYSLQHLASATASFSPENLVGRGGSSYVYRGHLPDGKELAVKILKPSVDVVKEFVQEIEILTTLDHKNIISLSGFCFEGNHLLLVYNFLSRGSLEENLHGNKKDSDAFGWKERFKVAVGVAEALDYLHNGCPQAVIHRDVKSSNILLSDDFEPQLSDFGLASWGTTSSHVASTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNKKPIDNECPKGQESLVMWATRILKDGKLSHLLDPNLGCEYDHCQINRMVLAATLCIRRASRLRPQISLILKLLQGDEEVTKWAEQEVNTPVDPDGLYEESVPTNIQSHLNLALLDVEDDAVSISSTEPTVSLEDYLQGRWSRSSSFN* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2113 716 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Amo11g2113 716 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 14 710 - -
Amo11g2113 716 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Amo11g2113 716 SMART serkin_6 372 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2113 716 SUPERFAMILY Protein kinase-like (PK-like) 354 642 IPR011009 -
Amo11g2113 716 ProSiteProfiles Protein kinase domain profile. 372 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2113 716 Pfam Universal stress protein family 18 144 IPR006016 -
Amo11g2113 716 PANTHER OS01G0253100 PROTEIN 14 710 IPR045271 GO:0004714|GO:0006468
Amo11g2113 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Amo11g2113 716 Gene3D Phosphorylase Kinase; domain 1 346 446 - -
Amo11g2113 716 Gene3D HUPs 17 149 IPR014729 -
Amo11g2113 716 Gene3D Transferase(Phosphotransferase) domain 1 447 660 - -
Amo11g2113 716 Pfam Protein kinase domain 375 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2113 716 CDD USP_Like 19 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2113 Amo-Chr11 116072663 116076546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2113 360 638 Trihelix Transcription Factor Family AT1G68690 43.310 9.29e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo11g2113 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2113 - - adu:107463283 1407.89