Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2094 ATGGTGTCGACATCTCAGAAGAAAAGCCTGCACTCTCTAATGGCAGCTAACCTGAGCAAGCTCACCATACCTTGTTCTTCATCATCACCACCTCCCAACAATGAACAGGATTTCGACTTTAACCATGTATTCGGGCACCACCACGACGAACCCTCAGCTGCAATGAGTCCGCACGTGATRCACAGCAGGTCCCACTCCTTTGTGGGCCCCTCCCCTCGCGTGGCCCCACCCTCCAACCCCATCCTCTCCTTCGTCAACGAACTCTCCTCTCAGAGCGAGGGAGAAGAATCCGAACAAGTGCCTCTCAATGTCATCGAAGAAGAGAAAGTGAGCCCTCGAATTGGGCCTGCGGATTTCGAGATTTTGAGGGTTGTTGGTCAGGGTTCGTTTGGGAAAGTGTTTCTTGTACGGAAGAAGAAGAAGCAGCAGCATCAAAAGAAAGAGAGCGAAGAAGAGTGCTGTGAAGATGGTGTGTTTGCGATGAAGGTGATGAGGAAGGAGACCATCATCAAGAAGAACCATGTGGATTACATGAAAGCTGAGAGGGATATTCTCACTAAAGTTGTTCATCCTTTCATTGTTCAACTTCGCTACTCTTTCCAGACTAAATCTAAGTTGTATTTGATTTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATCTCTATCGACAGGGCATCTTCAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAATGGCATCGTGCACCGGGATCTTAAACCTGAGAACATACTTATGGATGGTGATGGGCATGTGATGCTAACTGATTTCGGATTGTCGAAAGAGATTGACGAATCAGGAAGATCCAACTCTATGTGTGGGACCATGGAATATATGGCTCCGGAAATCATACTGGCCAAAGGCCATAATAAGGATGCAGATTGGTGGAGCATTGGTATTTTGTTGTATGAGATGCTAACAGGGAAGGCACCATTCACACACACGAACAAAAAGAAGCTTCAGGAGAAGATTATTAAAGAGAAAGTTAAACTTCCACCAACGGTTTCCACAGAAGCTCATTCTTTGCTCAAAGGGTTGCTGCAAAAGGATCCATCAACAAGGTTAGGCAACGGGCCAAATGGAGATGAACAGATCAAAAGTCACAAATGGTTTCGACCAATCAATTGGAAGAAATTGGAGGCGAGAGAACTCAAACCTAAGTTCAAACCAGATGTCTCCGGTAAAGAGTGTACAGCTAACTTTGACCAATGCTGGACGGCAATGCCTCCAGATGACTCACCAGCTTCCACTCCCACGGCCGGTGACCATTTCCATGGCTACACGTATGTCGCACCAAACCCTTGGCTTTCATCCAAATAG 1374 0.4629 MVSTSQKKSLHSLMAANLSKLTIPCSSSSPPPNNEQDFDFNHVFGHHHDEPSAAMSPHVXHSRSHSFVGPSPRVAPPSNPILSFVNELSSQSEGEESEQVPLNVIEEEKVSPRIGPADFEILRVVGQGSFGKVFLVRKKKKQQHQKKESEEECCEDGVFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDGDGHVMLTDFGLSKEIDESGRSNSMCGTMEYMAPEIILAKGHNKDADWWSIGILLYEMLTGKAPFTHTNKKKLQEKIIKEKVKLPPTVSTEAHSLLKGLLQKDPSTRLGNGPNGDEQIKSHKWFRPINWKKLEARELKPKFKPDVSGKECTANFDQCWTAMPPDDSPASTPTAGDHFHGYTYVAPNPWLSSK* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2094 457 Gene3D Transferase(Phosphotransferase) domain 1 213 408 - -
Amo11g2094 457 SUPERFAMILY Protein kinase-like (PK-like) 118 446 IPR011009 -
Amo11g2094 457 ProSiteProfiles Protein kinase domain profile. 119 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2094 457 Pfam Protein kinase C terminal domain 410 447 IPR017892 GO:0004674|GO:0005524|GO:0006468
Amo11g2094 457 Gene3D Phosphorylase Kinase; domain 1 117 432 - -
Amo11g2094 457 SMART serkin_6 119 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2094 457 MobiDBLite consensus disorder prediction 421 457 - -
Amo11g2094 457 MobiDBLite consensus disorder prediction 24 73 - -
Amo11g2094 457 ProSiteProfiles AGC-kinase C-terminal domain profile. 390 457 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo11g2094 457 MobiDBLite consensus disorder prediction 40 54 - -
Amo11g2094 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Amo11g2094 457 PANTHER RIBOSOMAL PROTEIN S6 KINASE 5 456 - -
Amo11g2094 457 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 456 - -
Amo11g2094 457 Coils Coil 132 152 - -
Amo11g2094 457 SMART pkinase_C_6 390 449 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo11g2094 457 Pfam Protein kinase domain 119 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2094 Amo-Chr11 114762671 114766117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2094 27 450 AGC Kinase Gene Family AT3G08720 56.798 4.92e-175 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Amo11g2094 Pkinase 8.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2094 K04688 - gmx:100798259 653.284