Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2042 ATGGACGTTGACAAGCTAGCATTTACTGGATCAACAGACACTGGAAAAATTGTGCTTGAATTGGCTGCAAGAAGCAATCTGAAGCTTATGACATTGGAGCTGGGAGGCAAATCAGCTTTCATTGTGTGTCATGATGCTGATGTTGACCACGCTGTTGAACAAGCAACCTTTGCTCTCTTCTTTAATAAGATACTGAAATTCAAATCTCAGATTGACACAGAACAATTTGAGAAAGTGCTTAAGTACATAAGATTTGGAACTGAAAGCAATGCTACCCTTGAATGTGAGGGTCAGCGATTGGGCTCAAAAGGCTTCTTCATCGAGCCAACTGTTTTCTCCAATGAT 345 0.4087 MDVDKLAFTGSTDTGKIVLELAARSNLKLMTLELGGKSAFIVCHDADVDHAVEQATFALFFNKILKFKSQIDTEQFEKVLKYIRFGTESNATLECEGQRLGSKGFFIEPTVFSND 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2042 115 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 37 IPR016162 GO:0016491
Amo11g2042 115 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 64 115 IPR016163 GO:0016620
Amo11g2042 115 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 68 114 - -
Amo11g2042 115 SUPERFAMILY ALDH-like 2 114 IPR016161 GO:0016491
Amo11g2042 115 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 1 63 - -
Amo11g2042 115 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 63 - -
Amo11g2042 115 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 32 39 IPR029510 GO:0016491
Amo11g2042 115 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 38 62 IPR016163 GO:0016620
Amo11g2042 115 Pfam Aldehyde dehydrogenase family 69 114 IPR015590 GO:0016491
Amo11g2042 115 Pfam Aldehyde dehydrogenase family 2 62 IPR015590 GO:0016491
Amo11g2042 115 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2042 Amo-Chr11 110778708 110779473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2042 1 114 Aldehyde Dehydrogenase Gene Family AT3G48000 53.595 6.71e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2042 K00128 - aip:110266317 204.527