Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2039 ATGGAGTTCAACAATCCTAAGGAAGCTGCTCGTATATATGAAGAGTACAGCCGGGTGAAGGGTTTTGCTGTTCGACAAGGTAAGAAGATAAAAAACAAGAGAGGAGAATTTGTGTGGATTACGTATTTGTGCAATAGAGAAGGTTTTCGGAACAAGAAATGGTTAGAAAAGCAGGATCGCAAAAGAGAGCACAAGGTTGTCACCCGTTGTGGGTGTCCTGCCAAGATGCGGATAAAGCCAAGAATTGGCACGGGAAAGTGGTTTGTGGCACGTTTTGTGAATGACCATAACCATGATCTCTTGCCTCAAAAGTTTGTGGAGTACTTGCCTGCGCATAGGAGGATTTCGGATGTTGACATAGCGCACATGGATAGCCTGCGGCAAGTGGGAATTTCAATCCCGAAAATATACGAGTCAATAGCAGCACAAGCTGGGGGTTTCAACCGCGTATCATTCACCAAGCGAGACATGTACAACGAGGTTAGGCGACAACGGTCCTTGCAGAATGGTGATGTCAATGCAGCACTAAGGTTCTTGGAGGTGGCTTCTAGGAGAGATGAGAAGATGTATTGGAGGTACGAGGTAGGGGTTGGTCAACACATGTGTGACTTATTCTGGAGTGACGGTCGTAGTCAGGAGGATTTCAAATTATTCGGTGATGTTCTTGCCTTTGATGCTACCTACGGACGAAACAAATACAATCTTCCAGTCGTTGTTTTCTCTGGGGTTAACAATCACAACCAGACATGTGTTTTTGCAACCGCAATGGTATCAAGTGAAACACAATCTTCGTATGTATGGGTTCTAAGAAAATTTCTTGAATGTATGGATGGCAGAGCTCCGAAGGCCATAATAACTGACGGGGATAGATCAATGCGACTAGCTATCCATGAGGTCTTTCCCGATGCTCATCATAGGCTTTGCGCATGGCACCTATTGAAAAATGCTATTTCCAATGTATGTATGCCGAGGTTCACATCCTTGTTTAGGCACTGCATGCTAGCAGACATAGAGGTGGAGGAGTTTGAGTTGCAGTGGGAAGCGATGGTGAGTGAGTGTGGCGTGAAGGATCATAAGTGGGTGAAGGATTTATACTCGAAGAAATTGTTGTGGGCCACAGCTTACATACGTGGAAGGTTCTTTGCTGGCATTAGGACGACTTCCCGATGCGAATCATTGCATGCGAAGCTTGGGCGGTTTGTGGAGAGCAGGTACGGGATTCTTGAATTCATAACAAATTTCCAGCAGTGTGTGGAATTCCTCAGAGACAACGAAGATGAGCTAGAGTTTCGATCATCATATGGGACCCCTGTAATCCAAACAGAGTTTCCCGAGCTGGAAAAATCAGGTGCAATGAATTTCACACGTGAGATTTTTGCAAGATACCGGGAGTCGTTGAAGAGGTGTGTGCGTGTTACAGTGTTAGGGTGCATAGAATCGGAAGGCACATGTACATACGTGACTCAGAAATATAGGAGGCCAGAGAAGAGGTGGAGCGTGACTCACCATGGAATGTCCGACACTTTTGTATGCACTTGCTTAAGGATGGAATCTTTCAGACTTCCTTGCGTCCACATACTTGCAGTGCTTGTCCGATTAGACATTGGGTCCCTCCCGAAGAGCCTGGTGCTGCAACGATGGTCGAAGGCAGCCAAGGTTGAAATGTCTGGGGTTAATCAAGTCGACAACACGGAGGCGTTTTATCGTAGCCGTGTTGGTGCGTTCTTGCAACATTGCAAAAGGTTCGCTCGGGTTGCTTGTCAGAGTGAAGAGAACTTCAAGGTGTACACAGAGAAAGTGGTAAAGGACACACTGAGGCTAGAAATGATAAATGGGGACGCTGGTGCTGGTGCAGGGAGTCCTCATGCGGCGCAGGGGGTTAGAGACCCAATTGGCGTTCGCACAAAGGGGACCGGGCGTGCTAATGAGCTGGTTGGTTCAAGGGCTGTCAAGCGGAGGAAGTGCAGCACATGCGGTTGCCTAGGTCATAGACGTACTCGATGTCCCAACGGGCCACGAGTAACAACTTCATATACAGAGCAGAACACCATGCCAAGTCAGCGTATGCCTAATAGAGACCTAACGGTGTCATATGCTGGCAATGAAAGCAACACTTGTCGAAGGAGGGTAGGCTAA 2136 0.4733 MEFNNPKEAARIYEEYSRVKGFAVRQGKKIKNKRGEFVWITYLCNREGFRNKKWLEKQDRKREHKVVTRCGCPAKMRIKPRIGTGKWFVARFVNDHNHDLLPQKFVEYLPAHRRISDVDIAHMDSLRQVGISIPKIYESIAAQAGGFNRVSFTKRDMYNEVRRQRSLQNGDVNAALRFLEVASRRDEKMYWRYEVGVGQHMCDLFWSDGRSQEDFKLFGDVLAFDATYGRNKYNLPVVVFSGVNNHNQTCVFATAMVSSETQSSYVWVLRKFLECMDGRAPKAIITDGDRSMRLAIHEVFPDAHHRLCAWHLLKNAISNVCMPRFTSLFRHCMLADIEVEEFELQWEAMVSECGVKDHKWVKDLYSKKLLWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYGILEFITNFQQCVEFLRDNEDELEFRSSYGTPVIQTEFPELEKSGAMNFTREIFARYRESLKRCVRVTVLGCIESEGTCTYVTQKYRRPEKRWSVTHHGMSDTFVCTCLRMESFRLPCVHILAVLVRLDIGSLPKSLVLQRWSKAAKVEMSGVNQVDNTEAFYRSRVGAFLQHCKRFARVACQSEENFKVYTEKVVKDTLRLEMINGDAGAGAGSPHAAQGVRDPIGVRTKGTGRANELVGSRAVKRRKCSTCGCLGHRRTRCPNGPRVTTSYTEQNTMPSQRMPNRDLTVSYAGNESNTCRRRVG* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2039 711 Pfam MULE transposase domain 221 315 IPR018289 -
Amo11g2039 711 Pfam SWIM zinc finger 511 531 IPR007527 GO:0008270
Amo11g2039 711 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 612 IPR031052 GO:0006355
Amo11g2039 711 ProSiteProfiles Zinc finger SWIM-type profile. 498 534 IPR007527 GO:0008270
Amo11g2039 711 PANTHER OS02G0262500 PROTEIN 2 612 - -
Amo11g2039 711 Pfam FAR1 DNA-binding domain 12 102 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2039 Amo-Chr11 110753414 110756968 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g2039 MULE 9.7e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2039 - - aip:107620408 933.71